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  5. AGT26696

AGT26696 (N559_5122, RbsB)


Aliases : N559_5122, RbsB

Description : D-ribose transporter subunit RbsB [Ensembl]. Periplasmic binding protein domain [InterProScan].


Gene families : OG_02_0000754 (OrthoFinder) Phylogenetic Tree(s): OG0000754_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT26696
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AAC76774 rbsB, b3751 D-ribose ABC transporter periplasmic binding protein;... 0.24 OrthoFinder
AAC77049 alsB, b4088 D-allose ABC transporter periplasmic binding protein... 0.15 OrthoFinder
AAL22742 STM3884, rbsB D-ribose transport protein [Ensembl]. Periplasmic... 0.12 OrthoFinder
AGT23754 N559_2032 putative rhizopine uptake ABC transport system... 0.05 OrthoFinder
AGT24254 N559_2574 putative ABC transporter, nucleotide binding/ATPase... 0.04 OrthoFinder
AGT25368 N559_3730 periplasmic binding protein/LacI transcriptional... 0.04 OrthoFinder
AGT25475 N559_3839 putative periplasmic binding protein [Ensembl].... 0.05 OrthoFinder
AGT26397 N559_4807 D-ribose periplasmic binding protein [Ensembl].... 0.07 OrthoFinder
CCL17793 BN171_1800016 ABC-type transport system, sugar-family extracellular... 0.04 OrthoFinder
CCL18506 rbsB, BN171_240011 ABC-type transport system, ribose-specific extracellular... 0.04 OrthoFinder
CRN86559 rbsB D-ribose-binding periplasmic protein precursor... 0.22 OrthoFinder
KNA60661 VCV51_032100 ribose transport system substrate-binding protein... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004565 beta-galactosidase activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
CC GO:0009341 beta-galactosidase complex IEP Enrichment
MF GO:0015925 galactosidase activity IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
InterPro domains Description Start Stop
IPR025997 SBP_2_dom 29 281
No external refs found!