AGT26713 (N559_5139)

Aliases : N559_5139

Description : periplasmic binding protein [Ensembl]. ABC transporter periplasmic binding domain [InterProScan].

Gene families : OG_02_0000473 (OrthoFinder) Phylogenetic Tree(s): OG0000473_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AGT26713
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AAC77246 fecB, b4290 ferric citrate ABC transporter periplasmic binding... 0.13 OrthoFinder
AAK99738 spr0934, ABC-SBP ABC transporter substrate-binding protein-iron transport... 0.02 OrthoFinder
AGT23901 N559_2189 putative iron compound ABC transport system periplasmic... 0.06 OrthoFinder
AHY40550 CJ8421_06795 Enterochelin uptake periplasmic binding protein... 0.03 OrthoFinder
CCL17854 BN171_1840014 ABC-type transport system, iron-family extracellular... 0.05 OrthoFinder
CCL19373 fhuD, BN171_3080020 ABC-type transport system, ferrichrome-specific... 0.04 OrthoFinder
CPC99411 sirA, ERS093114_01812 Siderophore staphylobactin ABC transporter%2C... 0.03 OrthoFinder
CPD36701 yhfQ_2, ERS093114_02679 iron(III) dicitrate-binding protein [Ensembl].... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004565 beta-galactosidase activity IEP Enrichment
MF GO:0005351 carbohydrate:proton symporter activity IEP Enrichment
MF GO:0005402 carbohydrate:cation symporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
CC GO:0009341 beta-galactosidase complex IEP Enrichment
MF GO:0015294 solute:cation symporter activity IEP Enrichment
MF GO:0015295 solute:proton symporter activity IEP Enrichment
MF GO:0015925 galactosidase activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
InterPro domains Description Start Stop
IPR002491 ABC_transptr_periplasmic_BD 40 269
No external refs found!