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  5. AGT26720

AGT26720 (N559_5146, GsiC)


Aliases : N559_5146, GsiC

Description : putative glutathione ABC transporter, permease protein GsiC [Ensembl]. transmembrane domain MetI-like [InterProScan].


Gene families : OG_02_0000034 (OrthoFinder) Phylogenetic Tree(s): OG0000034_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT26720
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AAC74375 sapB, b1293 antimicrobial peptide transport ABC transporter permease... 0.03 OrthoFinder
AAC76568 dppB, b3543 dipeptide/heme ABC transporter permease [Ensembl].... 0.05 OrthoFinder
AEA95055 opp2B, OG1RF_12368 oligopeptide ABC superfamily ATP binding cassette... 0.06 OrthoFinder
AGT24128 N559_2435 peptide ABC transporter membrane protein [Ensembl].... 0.04 OrthoFinder
CCL19135 appB, BN171_2880002 ABC-type transport system, oligopeptide-family permease... 0.03 OrthoFinder
CPC43653 oppB_1, ERS093114_00435 Oligopeptide transport system permease protein oppB... 0.02 OrthoFinder
CPC72096 opp-3B, ERS093114_01158 oligopeptide permease%2C channel-forming protein... 0.03 OrthoFinder
CPD17797 opp-1B, ERS093114_02217 Oligopeptide transporter putative membrane permease... 0.02 OrthoFinder
CRO32970 gsiC Glutathione transport system permease protein GsiC... 0.03 OrthoFinder
CRP12152 dppB Dipeptide transport system permease protein DppB... 0.04 OrthoFinder
KNA51872 VCV51_030402 binding-protein-dependent transport system inner... 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000746 conjugation IEP Enrichment
MF GO:0004803 transposase activity IEP Enrichment
BP GO:0006313 transposition, DNA-mediated IEP Enrichment
BP GO:0009404 toxin metabolic process IEP Enrichment
BP GO:0009405 obsolete pathogenesis IEP Enrichment
MF GO:0015109 chromate transmembrane transporter activity IEP Enrichment
MF GO:0015643 toxic substance binding IEP Enrichment
BP GO:0015703 chromate transport IEP Enrichment
BP GO:0019748 secondary metabolic process IEP Enrichment
BP GO:0030153 bacteriocin immunity IEP Enrichment
BP GO:0032196 transposition IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
MF GO:0043022 ribosome binding IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 112 303
No external refs found!