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AGT26871 (N559_5297)


Aliases : N559_5297

Description : SilA [Ensembl]. AcrB/AcrD/AcrF family [InterProScan].


Gene families : OG_02_0001226 (OrthoFinder) Phylogenetic Tree(s): OG0001226_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT26871
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AAC73676 cusA, b0575 copper/silver efflux system, membrane component... 0.08 OrthoFinder
AGT26164 N559_4563 hypothetical protein [Ensembl]. AcrB/AcrD/AcrF family... 0.07 OrthoFinder
CBI65707 cusA, HPB8_150 copper efflux system membrane protein CusA [Ensembl].... 0.03 OrthoFinder
CRP66075 cusA Cation efflux system protein CusA [Ensembl].... 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0009297 pilus assembly IEP Enrichment
MF GO:0015473 fimbrial usher porin activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Enrichment
BP GO:0043711 pilus organization IEP Enrichment
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1904949 ATPase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR001036 Acrflvin-R 6 1038
No external refs found!