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  5. AGT26874

AGT26874 (N559_5300, CusC)


Aliases : N559_5300, CusC

Description : Cation efflux system protein CusC [Ensembl].


Gene families : OG_02_0000126 (OrthoFinder) Phylogenetic Tree(s): OG0000126_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT26874
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AAC73673 cusC, b0572 copper/silver efflux system, outer membrane component... 0.08 OrthoFinder
AAL21076 STM2172, yohG putative outer membrane efflux protein [Ensembl]. Outer... 0.03 OrthoFinder
AGT21929 N559_0103, EefC multidrug efflux transport outer membrane protein EefC [Ensembl]. 0.04 OrthoFinder
AGT26161 N559_4560, CusC Cation efflux system protein CusC [Ensembl]. 0.15 OrthoFinder
AHY39621 CJ8421_01830 RND efflux system, outer membrane lipoprotein CmeC... 0.03 OrthoFinder
AKP14427 oprM, WX61_00345 Outer membrane protein OprM precursor [Ensembl]. Outer... 0.06 OrthoFinder
CRN65232 oprM_1 Outer membrane protein OprM precursor [Ensembl]. Outer... 0.05 OrthoFinder
CRO09433 oprM_2 Outer membrane protein OprM precursor [Ensembl]. Outer... 0.05 OrthoFinder
CRO58887 ttgI_1 Toluene efflux pump outer membrane protein TtgI... 0.04 OrthoFinder
CRO88249 oprM_3 Outer membrane protein OprM precursor [Ensembl]. Outer... 0.07 OrthoFinder
CRP22942 oprM_4 Outer membrane protein OprM precursor [Ensembl]. Outer... 0.04 OrthoFinder
CRP30142 ttgC_2 putative efflux pump outer membrane protein TtgC... 0.04 OrthoFinder
CRP32562 oprM_5 Outer membrane protein OprM precursor [Ensembl]. Outer... 0.04 OrthoFinder
CRP65645 ttgI_2 Toluene efflux pump outer membrane protein TtgI... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0015562 efflux transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0009297 pilus assembly IEP Enrichment
MF GO:0015473 fimbrial usher porin activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
BP GO:0043711 pilus organization IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR003423 OMP_efflux 65 248
IPR003423 OMP_efflux 275 456
No external refs found!