AKI48389 (L2625_00445)

Aliases : L2625_00445

Description : transcriptional regulator, LysR family [Ensembl]. LysR, Transcription regulator HTH [Interproscan].

Gene families : OG_02_0000002 (OrthoFinder) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AKI48389
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AAL22963 STM4125, oxyR regulatory protein sensor for oxidative stress... 0.03 OrthoFinder
AGT26606 N559_5029, OxyR DNA-binding transcriptional regulator OxyR [Ensembl].... 0.03 OrthoFinder
CCG27094 MtaR Methionine biosynthesis and transport regulator MtaR,... 0.04 OrthoFinder
EDJ91352 CGSHi22421_04593 putative HTH-type transcriptional regulator [Ensembl].... 0.03 OrthoFinder
KNA55364 VCV51_031056 LysR substrate binding domain-containing protein... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Enrichment
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010038 response to metal ion IEP Enrichment
CC GO:0042597 periplasmic space IEP Enrichment
BP GO:0046688 response to copper ion IEP Enrichment
InterPro domains Description Start Stop
IPR005119 LysR_subst-bd 87 289
IPR000847 Tscrpt_reg_HTH_LysR 3 61
No external refs found!