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Aliases : L2625_00552
Description : ABC transporter, substrate-binding protein [Ensembl]. ABC transporter periplasmic binding domain [Interproscan].
Gene families : OG_02_0001845 (OrthoFinder) Phylogenetic Tree(s): OG0001845_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AKI48490 | |
| Cluster | HCCA: Cluster_12 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| CPD06884 | fhuD, ERS093114_01977 | ferric hydroxamate receptor 1 [Ensembl]. Periplasmic... | 0.08 | OrthoFinder | |
| CPD12102 | fhuD2, ERS093114_02089 | Ferrichrome-binding periplasmic protein precursor... | 0.08 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| MF | GO:0004180 | carboxypeptidase activity | IEP | Enrichment |
| MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | Enrichment |
| MF | GO:0004601 | peroxidase activity | IEP | Enrichment |
| MF | GO:0005215 | transporter activity | IEP | Enrichment |
| MF | GO:0005506 | iron ion binding | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| BP | GO:0006399 | tRNA metabolic process | IEP | Enrichment |
| BP | GO:0008033 | tRNA processing | IEP | Enrichment |
| MF | GO:0009002 | serine-type D-Ala-D-Ala carboxypeptidase activity | IEP | Enrichment |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | Enrichment |
| MF | GO:0016887 | ATPase | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEP | Enrichment |
| MF | GO:0020037 | heme binding | IEP | Enrichment |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Enrichment |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Enrichment |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002491 | ABC_transptr_periplasmic_BD | 76 | 281 |
| No external refs found! |