AKI48804 (murF, L2625_00877)


Aliases : murF, L2625_00877

Description : UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase [Ensembl]. Mur ligase [Interproscan].


Gene families : OG_02_0000378 (OrthoFinder) Phylogenetic Tree(s): OG0000378_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AKI48804
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AAC73197 murF, b0086 UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine... 0.06 OrthoFinder
AAL00318 spr1514, murF UDP-N-acetylmuramoylalanine-D-glutamyl-lysine-D-alanyl-D-... 0.03 OrthoFinder
AAL19088 STM0124, murF D-alanine:D-alanine-adding enzyme [Ensembl]. Mur ligase... 0.05 OrthoFinder
AEA93262 ppx, OG1RF_10575 exopolyphosphatase [Ensembl]. Mur ligase family, Mur... 0.09 OrthoFinder
AGT25953 N559_4340 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine... 0.06 OrthoFinder
CBI66504 murF, HPB8_947 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,... 0.03 OrthoFinder
CCL19117 murF, BN171_2870047 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine... 0.04 OrthoFinder
CPD23446 murF, ERS093114_02347 UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C6-diaminopimela... 0.03 OrthoFinder
CRP08587 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine... 0.02 OrthoFinder
EDJ91936 murE, CGSHi22421_09273 UDP-N-acetylmuramoylalanyl-D-glutamate--2,... 0.04 OrthoFinder
EDJ91938 murE, CGSHi22421_09283 UDP-N-acetylmuramoylalanyl-D-glutamate--2,... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0016874 ligase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003883 CTP synthase activity IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004017 adenylate kinase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004478 methionine adenosyltransferase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004788 thiamine diphosphokinase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Enrichment
MF GO:0004832 valine-tRNA ligase activity IEP Enrichment
MF GO:0005436 sodium:phosphate symporter activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Enrichment
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006438 valyl-tRNA aminoacylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Enrichment
MF GO:0008830 dTDP-4-dehydrorhamnose 3,5-epimerase activity IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009229 thiamine diphosphate biosynthetic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015081 sodium ion transmembrane transporter activity IEP Enrichment
MF GO:0015293 symporter activity IEP Enrichment
MF GO:0015294 solute:cation symporter activity IEP Enrichment
MF GO:0015370 solute:sodium symporter activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
BP GO:0030258 lipid modification IEP Enrichment
BP GO:0030259 lipid glycosylation IEP Enrichment
MF GO:0030975 thiamine binding IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0042357 thiamine diphosphate metabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0043138 3'-5' DNA helicase activity IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044341 sodium-dependent phosphate transport IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0046500 S-adenosylmethionine metabolic process IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051304 chromosome separation IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR013221 Mur_ligase_cen 110 294
IPR000713 Mur_ligase_N 26 99
IPR004101 Mur_ligase_C 315 396
No external refs found!