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  5. AKI49342

AKI49342 (comGB, L2625_01438)


Aliases : comGB, L2625_01438

Description : general secretion pathway protein F [Ensembl]. Type II secretion system protein GspF domain [Interproscan].


Gene families : OG_02_0000229 (OrthoFinder) Phylogenetic Tree(s): OG0000229_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AKI49342
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AAC73217 hofC, b0106 assembly protein in type IV pilin biogenesis,... 0.03 OrthoFinder
AAC76352 gspF, b3327 general secretory pathway component, cryptic [Ensembl].... 0.03 OrthoFinder
AGT25881 N559_4261 pullulanase-specific type II secretion system component... 0.04 OrthoFinder
CCL19980 BN171_3610023 Putative type IV pilus secretion protein [Ensembl]. Type... 0.03 OrthoFinder
CRN98329 epsF_2 General secretion pathway protein F [Ensembl]. Type II... 0.03 OrthoFinder
CRO43809 epsF_3 General secretion pathway protein F [Ensembl]. Type II... 0.03 OrthoFinder
KNA55102 VCV51_031834 general secretion pathway protein F [Ensembl]. Type II... 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0004497 monooxygenase activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
BP GO:0006081 cellular aldehyde metabolic process IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Enrichment
MF GO:0016426 tRNA (adenine) methyltransferase activity IEP Enrichment
MF GO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Enrichment
MF GO:0018580 nitronate monooxygenase activity IEP Enrichment
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Enrichment
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Enrichment
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Enrichment
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Enrichment
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055070 copper ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
InterPro domains Description Start Stop
IPR018076 T2SS_GspF_dom 15 134
IPR018076 T2SS_GspF_dom 214 335
No external refs found!