AKI49729 (gltC, L2625_01870)

Aliases : gltC, L2625_01870

Description : transcriptional activator of the glutamate synthase operon [Ensembl]. LysR, Transcription regulator HTH [Interproscan].

Gene families : OG_02_0000002 (OrthoFinder) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AKI49729
Cluster	HCCA: Cluster_3

Target	Alias	Description	ECC score	Gene Family Method
AAL20406	STM1487, ynfL	putative LysR family transcriptional regulator...	0.04	OrthoFinder
AAL22693	STM3834	putative LysR family transcriptional regulator...	0.03	OrthoFinder
AEA93063	OG1RF_10376	LysR family transcriptional regulator [Ensembl]. LysR...	0.03	OrthoFinder
AGT23273	N559_1520, CynR	DNA-binding transcriptional regulator CynR [Ensembl]....	0.02	OrthoFinder
AGT24793	N559_3132	LysR family transcriptional regulator [Ensembl]. LysR...	0.02	OrthoFinder
CRO80200	cynR_3	Cyn operon transcriptional activator [Ensembl]. LysR...	0.02	OrthoFinder
KNA49512	VCV51_030313	LysR substrate binding domain-containing protein...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	Enrichment
MF	GO:0004497	monooxygenase activity	IEP	Enrichment
MF	GO:0004764	shikimate 3-dehydrogenase (NADP+) activity	IEP	Enrichment
MF	GO:0008887	glycerate kinase activity	IEP	Enrichment
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Enrichment
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	Enrichment
MF	GO:0018580	nitronate monooxygenase activity	IEP	Enrichment
BP	GO:0031388	organic acid phosphorylation	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR005119	LysR_subst-bd	88	290
IPR000847	Tscrpt_reg_HTH_LysR	3	62

External Links

No external refs found!