AKI50136 (L2625_02299)

Aliases : L2625_02299

Description : transcriptional antiterminator, putative [Ensembl]. Phosphotransferase system, PRD domain, Mga helix-turn-helix domain, Helix-turn-helix [Interproscan].

Gene families : OG_02_0000208 (OrthoFinder) Phylogenetic Tree(s): OG0000208_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AKI50136
Cluster	HCCA: Cluster_1

Target	Alias	Description	ECC score	Gene Family Method
AEA93919	OG1RF_11232	DNA-binding/PRD domain protein [Ensembl]. HTH domain,...	0.03	OrthoFinder
AKI48268	L2625_00321	transcriptional antiterminator [Ensembl]. Mga...	0.06	OrthoFinder
AKI48362	L2625_00417	transcriptional antiterminator [Ensembl]. PTS EIIA...	0.06	OrthoFinder
CCG26679	No alias	Transcriptional antiterminator of lichenan operon, BglG...	0.04	OrthoFinder
CCL18729	mtlR, BN171_2590017	Transcription antiterminator, PTS operon regulator...	0.03	OrthoFinder
CCL18911	BN171_2720011	Transcription antiterminator, PTS operon regulator...	0.05	OrthoFinder
CCL19451	BN171_3150014	Transcription antiterminator, PTS operon regulator...	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008643	carbohydrate transport	None	Extended
MF	GO:0008982	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity	IEA	Interproscan
BP	GO:0009401	phosphoenolpyruvate-dependent sugar phosphotransferase system	IEA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
MF	GO:0015144	carbohydrate transmembrane transporter activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Enrichment
BP	GO:0005975	carbohydrate metabolic process	IEP	Enrichment
BP	GO:0007165	signal transduction	IEP	Enrichment
MF	GO:0008270	zinc ion binding	IEP	Enrichment
MF	GO:0016782	transferase activity, transferring sulphur-containing groups	IEP	Enrichment
MF	GO:0016783	sulfurtransferase activity	IEP	Enrichment
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Enrichment
MF	GO:0016830	carbon-carbon lyase activity	IEP	Enrichment
MF	GO:0016832	aldehyde-lyase activity	IEP	Enrichment
MF	GO:0046914	transition metal ion binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003501	PTS_EIIB_2/3	399	459
IPR011608	PRD	302	389
IPR011608	PRD	192	277
IPR007737	Mga_HTH	88	159
IPR013196	HTH_11	10	62

External Links

No external refs found!

AKI50136 (L2625_02299)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation