AKI50136 (L2625_02299)

Aliases : L2625_02299

Description : transcriptional antiterminator, putative [Ensembl]. Phosphotransferase system, PRD domain, Mga helix-turn-helix domain, Helix-turn-helix [Interproscan].

Gene families : OG_02_0000208 (OrthoFinder) Phylogenetic Tree(s): OG0000208_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AKI50136
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AEA93919 OG1RF_11232 DNA-binding/PRD domain protein [Ensembl]. HTH domain,... 0.03 OrthoFinder
AKI48268 L2625_00321 transcriptional antiterminator [Ensembl]. Mga... 0.06 OrthoFinder
AKI48362 L2625_00417 transcriptional antiterminator [Ensembl]. PTS EIIA... 0.06 OrthoFinder
CCG26679 No alias Transcriptional antiterminator of lichenan operon, BglG... 0.04 OrthoFinder
CCL18729 mtlR, BN171_2590017 Transcription antiterminator, PTS operon regulator... 0.03 OrthoFinder
CCL18911 BN171_2720011 Transcription antiterminator, PTS operon regulator... 0.05 OrthoFinder
CCL19451 BN171_3150014 Transcription antiterminator, PTS operon regulator... 0.04 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEA Interproscan
BP GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016783 sulfurtransferase activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
InterPro domains Description Start Stop
IPR003501 PTS_EIIB_2/3 399 459
IPR011608 PRD 302 389
IPR011608 PRD 192 277
IPR007737 Mga_HTH 88 159
IPR013196 HTH_11 10 62
No external refs found!