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  5. AKI50549

AKI50549 (rpmD, L2625_02759)


Aliases : rpmD, L2625_02759

Description : ribosomal protein L30 [Ensembl]. Ribosomal protein L30 [Interproscan].


Gene families : OG_02_0000682 (OrthoFinder) Phylogenetic Tree(s): OG0000682_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AKI50549
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AAC76327 rpmD, b3302 50S ribosomal subunit protein L30 [Ensembl]. Ribosomal... 0.07 OrthoFinder
AAK99011 spr0207, rpmD 50S Ribosomal protein L30 [Ensembl]. Ribosomal protein... 0.03 OrthoFinder
AAL22285 STM3422, rpmD 50S ribosomal subunit protein L30 [Ensembl]. Ribosomal... 0.07 OrthoFinder
AEA92856 rpmD, OG1RF_10169 50S ribosomal protein L30 [Ensembl]. Ribosomal protein... 0.06 OrthoFinder
AKP15140 rpmD, WX61_01086 50S ribosomal protein L30 [Ensembl]. Ribosomal protein... 0.07 OrthoFinder
CCL20581 rpmD, BN171_70021 50S ribosomal protein L30 [Ensembl]. Ribosomal protein... 0.04 OrthoFinder
CCP43466 rpmD, Rv0722 50S ribosomal protein L30 RpmD [Ensembl]. Ribosomal... 0.08 OrthoFinder
CPD14133 rpmD, ERS093114_02140 50S ribosomal protein L30 [Ensembl]. Ribosomal protein... 0.09 OrthoFinder
EDJ91374 rpmD, CGSHi22421_04703 50S ribosomal protein L30 [Ensembl]. Ribosomal protein... 0.06 OrthoFinder
KNA54990 VCV51_033173 ribosomal protein L30 [Ensembl]. Ribosomal protein... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0004417 hydroxyethylthiazole kinase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006772 thiamine metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008452 RNA ligase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009228 thiamine biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0030312 external encapsulating structure IEP Enrichment
CC GO:0031012 extracellular matrix IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0042723 thiamine-containing compound metabolic process IEP Enrichment
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR016082 Ribosomal_L30_ferredoxin-like 5 54
No external refs found!