- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : potF_1, WX61_00480
Description : Putrescine-binding periplasmic protein precursor [Ensembl].
Gene families : OG_02_0000121 (OrthoFinder) Phylogenetic Tree(s): OG0000121_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AKP14561 | |
| Cluster | HCCA: Cluster_14 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAC73941 | potF, b0854 | putrescine ABC transporter periplasmic binding protein... | 0.03 | OrthoFinder | |
| AAC74207 | potD, b1123 | spermidine/putrescine ABC transporter periplasmic... | 0.02 | OrthoFinder | |
| AAL19813 | STM0877, potF | ABC superfamily (peri_perm), putrescine transporter... | 0.03 | OrthoFinder | |
| AKI48760 | potD, L2625_00831 | spermidine/putrescine ABC transporter, substrate-binding... | 0.03 | OrthoFinder | |
| CRN74500 | potF_1 | Putrescine-binding periplasmic protein precursor... | 0.04 | OrthoFinder | |
| KNA57820 | VCV51_032789 | bacterial extracellular solute-binding protein... | 0.05 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | Enrichment |
| MF | GO:0003746 | translation elongation factor activity | IEP | Enrichment |
| MF | GO:0003871 | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity | IEP | Enrichment |
| MF | GO:0003937 | IMP cyclohydrolase activity | IEP | Enrichment |
| MF | GO:0004356 | glutamate-ammonia ligase activity | IEP | Enrichment |
| MF | GO:0004427 | inorganic diphosphatase activity | IEP | Enrichment |
| MF | GO:0004643 | phosphoribosylaminoimidazolecarboxamide formyltransferase activity | IEP | Enrichment |
| BP | GO:0006414 | translational elongation | IEP | Enrichment |
| BP | GO:0006541 | glutamine metabolic process | IEP | Enrichment |
| BP | GO:0006542 | glutamine biosynthetic process | IEP | Enrichment |
| BP | GO:0006555 | methionine metabolic process | IEP | Enrichment |
| MF | GO:0008172 | S-methyltransferase activity | IEP | Enrichment |
| BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
| BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Enrichment |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:0009086 | methionine biosynthetic process | IEP | Enrichment |
| CC | GO:0009279 | cell outer membrane | IEP | Enrichment |
| MF | GO:0015267 | channel activity | IEP | Enrichment |
| MF | GO:0015288 | porin activity | IEP | Enrichment |
| MF | GO:0016211 | ammonia ligase activity | IEP | Enrichment |
| MF | GO:0016880 | acid-ammonia (or amide) ligase activity | IEP | Enrichment |
| MF | GO:0019238 | cyclohydrolase activity | IEP | Enrichment |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0022829 | wide pore channel activity | IEP | Enrichment |
| MF | GO:0042085 | 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity | IEP | Enrichment |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Enrichment |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Enrichment |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |