AKP15019 (sigR, WX61_00956)


Aliases : sigR, WX61_00956

Description : ECF RNA polymerase sigma factor SigR [Ensembl]. Sigma-70 region 2 [Interproscan].


Gene families : OG_02_0000184 (OrthoFinder) Phylogenetic Tree(s): OG0000184_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AKP15019
Cluster HCCA: Cluster_4


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006352 DNA-templated transcription, initiation IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0016987 sigma factor activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004803 transposase activity IEP Enrichment
MF GO:0005283 amino acid:sodium symporter activity IEP Enrichment
MF GO:0005342 organic acid transmembrane transporter activity IEP Enrichment
MF GO:0005343 organic acid:sodium symporter activity IEP Enrichment
MF GO:0005416 amino acid:cation symporter activity IEP Enrichment
BP GO:0006189 'de novo' IMP biosynthetic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006313 transposition, DNA-mediated IEP Enrichment
BP GO:0006535 cysteine biosynthetic process from serine IEP Enrichment
BP GO:0006563 L-serine metabolic process IEP Enrichment
BP GO:0006814 sodium ion transport IEP Enrichment
BP GO:0006865 amino acid transport IEP Enrichment
MF GO:0008374 O-acyltransferase activity IEP Enrichment
MF GO:0008514 organic anion transmembrane transporter activity IEP Enrichment
MF GO:0008887 glycerate kinase activity IEP Enrichment
MF GO:0009001 serine O-acetyltransferase activity IEP Enrichment
BP GO:0009070 serine family amino acid biosynthetic process IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
MF GO:0015081 sodium ion transmembrane transporter activity IEP Enrichment
MF GO:0015171 amino acid transmembrane transporter activity IEP Enrichment
MF GO:0015175 neutral amino acid transmembrane transporter activity IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015293 symporter activity IEP Enrichment
MF GO:0015294 solute:cation symporter activity IEP Enrichment
MF GO:0015370 solute:sodium symporter activity IEP Enrichment
MF GO:0015655 alanine:sodium symporter activity IEP Enrichment
BP GO:0015711 organic anion transport IEP Enrichment
BP GO:0015804 neutral amino acid transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
MF GO:0016412 serine O-acyltransferase activity IEP Enrichment
MF GO:0016413 O-acetyltransferase activity IEP Enrichment
BP GO:0019344 cysteine biosynthetic process IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
MF GO:0022858 alanine transmembrane transporter activity IEP Enrichment
BP GO:0031388 organic acid phosphorylation IEP Enrichment
BP GO:0032196 transposition IEP Enrichment
BP GO:0032328 alanine transport IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
BP GO:0046942 carboxylic acid transport IEP Enrichment
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
InterPro domains Description Start Stop
IPR007627 RNA_pol_sigma70_r2 15 77
IPR013249 RNA_pol_sigma70_r4_t2 129 180
No external refs found!