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  5. AKP15653

AKP15653 (rluD, WX61_01615)


Aliases : rluD, WX61_01615

Description : Ribosomal large subunit pseudouridine synthase D [Ensembl]. S4 domain, RNA pseudouridylate synthase [Interproscan].


Gene families : OG_02_0000046 (OrthoFinder) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AKP15653
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
CBI66509 rluD1, HPB8_952 ribosomal large subunit pseudouridine synthase D... 0.02 OrthoFinder
EDJ90258 metN, CGSHi22421_06444 DL-methionine transporter ATP-binding subunit [Ensembl].... 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0009451 RNA modification IEA Interproscan
MF GO:0009982 pseudouridine synthase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006535 cysteine biosynthetic process from serine IEP Enrichment
BP GO:0006563 L-serine metabolic process IEP Enrichment
BP GO:0006820 anion transport IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008374 O-acyltransferase activity IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP Enrichment
MF GO:0009001 serine O-acetyltransferase activity IEP Enrichment
BP GO:0009070 serine family amino acid biosynthetic process IEP Enrichment
BP GO:0009292 genetic transfer IEP Enrichment
BP GO:0009294 DNA mediated transformation IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016412 serine O-acyltransferase activity IEP Enrichment
MF GO:0016413 O-acetyltransferase activity IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0016849 phosphorus-oxygen lyase activity IEP Enrichment
BP GO:0019344 cysteine biosynthetic process IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0043138 3'-5' DNA helicase activity IEP Enrichment
BP GO:0044764 multi-organism cellular process IEP Enrichment
BP GO:0051704 multi-organism process IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
InterPro domains Description Start Stop
IPR002942 S4_RNA-bd 40 78
IPR006145 PsdUridine_synth_RsuA/RluA 114 263
No external refs found!