Aliases : rlmJ, WX61_02074
Description : Ribosomal RNA large subunit methyltransferase J [Ensembl]. Ribosomal RNA large subunit methyltransferase D [Interproscan].
Gene families : OG_02_0001980 (OrthoFinder) Phylogenetic Tree(s): OG0001980_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AKP16100 | |
Cluster | HCCA: Cluster_19 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
EDJ91554 | CGSHi22421_07282 | hypothetical protein [Ensembl]. Ribosomal RNA large... | 0.05 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008649 | rRNA methyltransferase activity | IEA | Interproscan |
BP | GO:0070475 | rRNA base methylation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003910 | DNA ligase (ATP) activity | IEP | Enrichment |
MF | GO:0003941 | L-serine ammonia-lyase activity | IEP | Enrichment |
MF | GO:0004146 | dihydrofolate reductase activity | IEP | Enrichment |
MF | GO:0004620 | phospholipase activity | IEP | Enrichment |
BP | GO:0006081 | cellular aldehyde metabolic process | IEP | Enrichment |
BP | GO:0006281 | DNA repair | IEP | Enrichment |
BP | GO:0006353 | DNA-templated transcription, termination | IEP | Enrichment |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Enrichment |
MF | GO:0008914 | leucyltransferase activity | IEP | Enrichment |
BP | GO:0009240 | isopentenyl diphosphate biosynthetic process | IEP | Enrichment |
MF | GO:0016298 | lipase activity | IEP | Enrichment |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Enrichment |
MF | GO:0016726 | oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor | IEP | Enrichment |
MF | GO:0016755 | aminoacyltransferase activity | IEP | Enrichment |
MF | GO:0016841 | ammonia-lyase activity | IEP | Enrichment |
BP | GO:0019288 | isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | IEP | Enrichment |
BP | GO:0019682 | glyceraldehyde-3-phosphate metabolic process | IEP | Enrichment |
BP | GO:0033554 | cellular response to stress | IEP | Enrichment |
BP | GO:0046490 | isopentenyl diphosphate metabolic process | IEP | Enrichment |
BP | GO:0046653 | tetrahydrofolate metabolic process | IEP | Enrichment |
BP | GO:0046654 | tetrahydrofolate biosynthetic process | IEP | Enrichment |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Enrichment |
BP | GO:0050992 | dimethylallyl diphosphate biosynthetic process | IEP | Enrichment |
BP | GO:0050993 | dimethylallyl diphosphate metabolic process | IEP | Enrichment |
BP | GO:0051716 | cellular response to stimulus | IEP | Enrichment |
MF | GO:0051745 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007473 | RlmJ | 55 | 294 |
No external refs found! |