AHY39565 (CJ8421_01540)

Aliases : CJ8421_01540

Description : 50S ribosomal protein L25/general stress protein Ctc [Ensembl]. Ribosomal L25p family, Ribosomal protein TL5 [Interproscan].

Gene families : OG_02_0000710 (OrthoFinder) Phylogenetic Tree(s): OG0000710_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AHY39565
Cluster	HCCA: Cluster_8

Target	Alias	Description	ECC score	Gene Family Method
AAC75246	rplY, b2185	50S ribosomal subunit protein L25 [Ensembl]. Ribosomal...	0.15	OrthoFinder
AAL21127	STM2224, rplY	50S ribosomal subunit protein L25 [Ensembl]. Ribosomal...	0.27	OrthoFinder
AGT23381	N559_1635	ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5...	0.06	OrthoFinder
CPD35474	rplY, ERS093114_02652	50S ribosomal protein L25 [Ensembl]. Ribosomal L25p...	0.06	OrthoFinder
CRO62512	rplY	General stress protein CTC [Ensembl]. Ribosomal L25p...	0.17	OrthoFinder
EDJ90895	CGSHi22421_03563	50S ribosomal protein L25 [Ensembl]. Ribosomal L25p...	0.07	OrthoFinder
KNA58241	VCV51_031088	ribosomal L25p family protein [Ensembl]. Ribosomal L25p...	0.14	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003723	RNA binding	IEP	Enrichment
MF	GO:0003922	GMP synthase (glutamine-hydrolyzing) activity	IEP	Enrichment
MF	GO:0004478	methionine adenosyltransferase activity	IEP	Enrichment
BP	GO:0006556	S-adenosylmethionine biosynthetic process	IEP	Enrichment
MF	GO:0008135	translation factor activity, RNA binding	IEP	Enrichment
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	Enrichment
MF	GO:0019843	rRNA binding	IEP	Enrichment
MF	GO:0045182	translation regulator activity	IEP	Enrichment
BP	GO:0046500	S-adenosylmethionine metabolic process	IEP	Enrichment
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR020057	Ribosomal_L25_b-dom	99	177
IPR029751	Ribosomal_L25	2	87

External Links

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AHY39565 (CJ8421_01540)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation