AHY39565 (CJ8421_01540)


Aliases : CJ8421_01540

Description : 50S ribosomal protein L25/general stress protein Ctc [Ensembl]. Ribosomal L25p family, Ribosomal protein TL5 [Interproscan].


Gene families : OG_02_0000710 (OrthoFinder) Phylogenetic Tree(s): OG0000710_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AHY39565
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AAC75246 rplY, b2185 50S ribosomal subunit protein L25 [Ensembl]. Ribosomal... 0.15 OrthoFinder
AAL21127 STM2224, rplY 50S ribosomal subunit protein L25 [Ensembl]. Ribosomal... 0.27 OrthoFinder
AGT23381 N559_1635 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5... 0.06 OrthoFinder
CPD35474 rplY, ERS093114_02652 50S ribosomal protein L25 [Ensembl]. Ribosomal L25p... 0.06 OrthoFinder
CRO62512 rplY General stress protein CTC [Ensembl]. Ribosomal L25p... 0.17 OrthoFinder
EDJ90895 CGSHi22421_03563 50S ribosomal protein L25 [Ensembl]. Ribosomal L25p... 0.07 OrthoFinder
KNA58241 VCV51_031088 ribosomal L25p family protein [Ensembl]. Ribosomal L25p... 0.14 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004478 methionine adenosyltransferase activity IEP Enrichment
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046500 S-adenosylmethionine metabolic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
InterPro domains Description Start Stop
IPR020057 Ribosomal_L25_b-dom 99 177
IPR029751 Ribosomal_L25 2 87
No external refs found!