Aliases : BN171_2380003
Description : Two-component response regulator [Ensembl]. Response regulator receiver domain, Transcriptional regulatory protein [Interproscan].
Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: CCL18472 | |
Cluster | HCCA: Cluster_3 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAC76061 | qseB, b3025 | quorum sensing DNA-binding response regulator in... | 0.02 | OrthoFinder | |
AAK99382 | spr0578, rr09 | Response regulator [Ensembl]. Helix-turn-helix domain,... | 0.04 | OrthoFinder | |
AAL00278 | spr1474, rr01 | Response regulator [Ensembl]. Transcriptional regulatory... | 0.04 | OrthoFinder | |
AEA92946 | OG1RF_10259 | response regulator [Ensembl]. Response regulator... | 0.03 | OrthoFinder | |
AEA95261 | OG1RF_12574 | response regulator [Ensembl]. Response regulator... | 0.04 | OrthoFinder | |
AGT22533 | N559_0740, QseB | DNA-binding transcriptional regulator QseB [Ensembl].... | 0.03 | OrthoFinder | |
AGT25258 | N559_3616, KdpE | KDP operon transcriptional regulatory protein KdpE... | 0.03 | OrthoFinder | |
AGT25698 | N559_4072, PhoB | transcriptional regulator PhoB [Ensembl]. Response... | 0.03 | OrthoFinder | |
AHY40431 | CJ8421_06120 | DNA-binding response regulator [Ensembl].... | 0.02 | OrthoFinder | |
AKI49504 | L2625_01607 | DNA-binding response regulator [Ensembl]. Signal... | 0.05 | OrthoFinder | |
AKI49943 | resD, L2625_02095 | DNA-binding response regulator [Ensembl]. OmpR/PhoB-type... | 0.03 | OrthoFinder | |
AKP15489 | ompR, WX61_01443 | Transcriptional regulatory protein OmpR [Ensembl].... | 0.02 | OrthoFinder | |
CCL20251 | BN171_390005 | Two-component response regulator [Ensembl]. Response... | 0.04 | OrthoFinder | |
CPC50543 | saeR, ERS093114_00646 | Response regulator SaeR [Ensembl]. Transcriptional... | 0.06 | OrthoFinder | |
CPC70217 | vicR, ERS093114_01104 | Two-component response regulator [Ensembl].... | 0.02 | OrthoFinder | |
CRN89694 | tctD | Transcriptional regulatory protein tctD [Ensembl].... | 0.03 | OrthoFinder | |
CRO24960 | ompR_1 | Transcriptional regulatory protein OmpR [Ensembl].... | 0.03 | OrthoFinder | |
CRO38230 | rstA | Transcriptional regulatory protein RstA [Ensembl].... | 0.04 | OrthoFinder | |
CRO52494 | czcR_1 | Transcriptional activator protein CzcR [Ensembl].... | 0.02 | OrthoFinder | |
CRP45027 | ompR_4 | Transcriptional regulatory protein OmpR [Ensembl].... | 0.04 | OrthoFinder | |
CRP58313 | czcR_4 | Transcriptional activator protein CzcR [Ensembl].... | 0.04 | OrthoFinder | |
KNA54887 | VCV51_031804 | response regulator receiver domain-containing protein... | 0.04 | OrthoFinder | |
KNA55120 | VCV51_031823 | response regulator receiver domain-containing protein... | 0.03 | OrthoFinder | |
KNA58243 | VCV51_032751 | response regulator receiver domain-containing protein... | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000160 | phosphorelay signal transduction system | IEA | Interproscan |
MF | GO:0003677 | DNA binding | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003919 | FMN adenylyltransferase activity | IEP | Enrichment |
MF | GO:0004476 | mannose-6-phosphate isomerase activity | IEP | Enrichment |
MF | GO:0004665 | prephenate dehydrogenase (NADP+) activity | IEP | Enrichment |
MF | GO:0004764 | shikimate 3-dehydrogenase (NADP+) activity | IEP | Enrichment |
MF | GO:0004788 | thiamine diphosphokinase activity | IEP | Enrichment |
BP | GO:0006570 | tyrosine metabolic process | IEP | Enrichment |
BP | GO:0006571 | tyrosine biosynthetic process | IEP | Enrichment |
BP | GO:0006771 | riboflavin metabolic process | IEP | Enrichment |
MF | GO:0008531 | riboflavin kinase activity | IEP | Enrichment |
MF | GO:0008977 | prephenate dehydrogenase (NAD+) activity | IEP | Enrichment |
BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | Enrichment |
BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Enrichment |
BP | GO:0009095 | aromatic amino acid family biosynthetic process, prephenate pathway | IEP | Enrichment |
BP | GO:0009229 | thiamine diphosphate biosynthetic process | IEP | Enrichment |
BP | GO:0009231 | riboflavin biosynthetic process | IEP | Enrichment |
MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | Enrichment |
MF | GO:0016778 | diphosphotransferase activity | IEP | Enrichment |
MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | Enrichment |
MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | Enrichment |
BP | GO:0042357 | thiamine diphosphate metabolic process | IEP | Enrichment |
BP | GO:0042726 | flavin-containing compound metabolic process | IEP | Enrichment |
BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | Enrichment |
BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Enrichment |
MF | GO:0070566 | adenylyltransferase activity | IEP | Enrichment |
BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Enrichment |
BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Enrichment |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Enrichment |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
UniProtKB | U3WWP9 |