CCL18472 (BN171_2380003)


Aliases : BN171_2380003

Description : Two-component response regulator [Ensembl]. Response regulator receiver domain, Transcriptional regulatory protein [Interproscan].


Gene families : OG_02_0000001 (OrthoFinder) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CCL18472
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AAC76061 qseB, b3025 quorum sensing DNA-binding response regulator in... 0.02 OrthoFinder
AAK99382 spr0578, rr09 Response regulator [Ensembl]. Helix-turn-helix domain,... 0.04 OrthoFinder
AAL00278 spr1474, rr01 Response regulator [Ensembl]. Transcriptional regulatory... 0.04 OrthoFinder
AEA92946 OG1RF_10259 response regulator [Ensembl]. Response regulator... 0.03 OrthoFinder
AEA95261 OG1RF_12574 response regulator [Ensembl]. Response regulator... 0.04 OrthoFinder
AGT22533 N559_0740, QseB DNA-binding transcriptional regulator QseB [Ensembl].... 0.03 OrthoFinder
AGT25258 N559_3616, KdpE KDP operon transcriptional regulatory protein KdpE... 0.03 OrthoFinder
AGT25698 N559_4072, PhoB transcriptional regulator PhoB [Ensembl]. Response... 0.03 OrthoFinder
AHY40431 CJ8421_06120 DNA-binding response regulator [Ensembl].... 0.02 OrthoFinder
AKI49504 L2625_01607 DNA-binding response regulator [Ensembl]. Signal... 0.05 OrthoFinder
AKI49943 resD, L2625_02095 DNA-binding response regulator [Ensembl]. OmpR/PhoB-type... 0.03 OrthoFinder
AKP15489 ompR, WX61_01443 Transcriptional regulatory protein OmpR [Ensembl].... 0.02 OrthoFinder
CCL20251 BN171_390005 Two-component response regulator [Ensembl]. Response... 0.04 OrthoFinder
CPC50543 saeR, ERS093114_00646 Response regulator SaeR [Ensembl]. Transcriptional... 0.06 OrthoFinder
CPC70217 vicR, ERS093114_01104 Two-component response regulator [Ensembl].... 0.02 OrthoFinder
CRN89694 tctD Transcriptional regulatory protein tctD [Ensembl].... 0.03 OrthoFinder
CRO24960 ompR_1 Transcriptional regulatory protein OmpR [Ensembl].... 0.03 OrthoFinder
CRO38230 rstA Transcriptional regulatory protein RstA [Ensembl].... 0.04 OrthoFinder
CRO52494 czcR_1 Transcriptional activator protein CzcR [Ensembl].... 0.02 OrthoFinder
CRP45027 ompR_4 Transcriptional regulatory protein OmpR [Ensembl].... 0.04 OrthoFinder
CRP58313 czcR_4 Transcriptional activator protein CzcR [Ensembl].... 0.04 OrthoFinder
KNA54887 VCV51_031804 response regulator receiver domain-containing protein... 0.04 OrthoFinder
KNA55120 VCV51_031823 response regulator receiver domain-containing protein... 0.03 OrthoFinder
KNA58243 VCV51_032751 response regulator receiver domain-containing protein... 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003919 FMN adenylyltransferase activity IEP Enrichment
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Enrichment
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004788 thiamine diphosphokinase activity IEP Enrichment
BP GO:0006570 tyrosine metabolic process IEP Enrichment
BP GO:0006571 tyrosine biosynthetic process IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
MF GO:0008531 riboflavin kinase activity IEP Enrichment
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Enrichment
BP GO:0009229 thiamine diphosphate biosynthetic process IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
BP GO:0042357 thiamine diphosphate metabolic process IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001867 OmpR/PhoB-type_DNA-bd 147 218
IPR001789 Sig_transdc_resp-reg_receiver 5 114
UniProtKB U3WWP9