AAL19107 (STM0143, hofB)

Aliases : STM0143, hofB

Description : putative integral membrane protein [Ensembl]. Type II secretion system (T2SS), Type II/IV secretion system protein [Interproscan].

Gene families : OG_02_0000073 (OrthoFinder) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AAL19107
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AAC73218 hofB, b0107 T2SE secretion family protein; P-loop ATPase superfamily... 0.02 OrthoFinder
AAC75987 yggR, b2950 putative PilT family AAA+ ATPase [Ensembl]. Type II/IV... 0.11 OrthoFinder
AGT22638 N559_0849 twitching motility protein [Ensembl]. 0.07 OrthoFinder
AGT25933 N559_4320 hypothetical protein [Ensembl]. N-terminal domain [InterProScan]. 0.04 OrthoFinder
CRN95468 epsE_2 Type II traffic warden ATPase [Ensembl]. Type II/IV... 0.04 OrthoFinder
CRN98354 xpsE_1 Type II traffic warden ATPase [Ensembl]. Type II... 0.03 OrthoFinder
EDJ90499 CGSHi22421_06362 protein transport protein [Ensembl]. Type II secretion... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0008740 L-rhamnose isomerase activity IEP Enrichment
BP GO:0009297 pilus assembly IEP Enrichment
MF GO:0015159 polysaccharide transmembrane transporter activity IEP Enrichment
MF GO:0015473 fimbrial usher porin activity IEP Enrichment
BP GO:0015774 polysaccharide transport IEP Enrichment
BP GO:0019299 rhamnose metabolic process IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0022884 macromolecule transmembrane transporter activity IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
CC GO:0030288 outer membrane-bounded periplasmic space IEP Enrichment
BP GO:0043711 pilus organization IEP Enrichment
BP GO:0045229 external encapsulating structure organization IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071555 cell wall organization IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
InterPro domains Description Start Stop
IPR007831 T2SS_GspE_N 9 62
IPR001482 T2SS/T4SS 90 353
No external refs found!