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AAL19258 (STM0301, safC)


Aliases : STM0301, safC

Description : putative fimbriae usher [Ensembl]. PapC N-terminal domain, PapC C-terminal domain, Outer membrane usher protein [Interproscan].


Gene families : OG_02_0000166 (OrthoFinder) Phylogenetic Tree(s): OG0000166_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL19258
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC73634 sfmD, b0532 putative outer membrane export usher protein [Ensembl].... 0.04 OrthoFinder
AAC74026 elfC, b0940 putative outer membrane fimbrial subunit export usher... 0.03 OrthoFinder
AAC75170 yehB, b2109 putative outer membrane protein [Ensembl]. PapC... 0.04 OrthoFinder
AGT25491 N559_3855 fimbrial usher protein [Ensembl]. PapC N-terminal... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0009297 pilus assembly IEA Interproscan
MF GO:0015473 fimbrial usher porin activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0046917 triphosphoribosyl-dephospho-CoA synthase activity IEP Enrichment
InterPro domains Description Start Stop
IPR025885 PapC_N 25 170
IPR000015 Fimb_usher 190 749
IPR025949 PapC-like_C 758 821
No external refs found!