AAL19293 (STM0339, stbB)

Aliases : STM0339, stbB

Description : putative fimbriae; chaparone [Ensembl]. Pili assembly chaperone PapD, Pili and flagellar-assembly chaperone [Interproscan].

Gene families : OG_02_0000278 (OrthoFinder) Phylogenetic Tree(s): OG0000278_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AAL19293
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AAC75171 yehC, b2110 putative periplasmic pilin chaperone [Ensembl]. Pili... 0.05 OrthoFinder
AGT23015 N559_1251 pilin chaperone [Ensembl]. C-terminal domain, PapD... 0.03 OrthoFinder
AGT24312 N559_2636 putative fimbrial chaperone [Ensembl]. C-terminal... 0.05 OrthoFinder
AGT25492 N559_3856 pilin chaperone [Ensembl]. PapD N-terminal domain,... 0.05 OrthoFinder
CRO24349 ecpD_4 Chaperone protein EcpD precursor [Ensembl]. Pili... 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0030288 outer membrane-bounded periplasmic space IEA Interproscan
BP GO:0071555 cell wall organization IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003911 DNA ligase (NAD+) activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0008645 hexose transmembrane transport IEP Enrichment
MF GO:0008740 L-rhamnose isomerase activity IEP Enrichment
BP GO:0009297 pilus assembly IEP Enrichment
MF GO:0015149 hexose transmembrane transporter activity IEP Enrichment
MF GO:0015153 rhamnose transmembrane transporter activity IEP Enrichment
MF GO:0015473 fimbrial usher porin activity IEP Enrichment
BP GO:0019299 rhamnose metabolic process IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
BP GO:0043711 pilus organization IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR016148 Pili_assmbl_chaperone_C 180 243
IPR016147 Pili_assmbl_chaperone_N 30 154
No external refs found!