AAL19461 (STM0507, ybbA)

Aliases : STM0507, ybbA

Description : putative ABC superfamily (atp_bind) transporter [Ensembl]. ABC transporter [Interproscan].

Gene families : OG_02_0000003 (OrthoFinder) Phylogenetic Tree(s): OG0000003_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AAL19461
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AAL00604 spr1801, ABC-NBD ABC transporter ATP-binding protein-unknown substrate... 0.02 OrthoFinder
AEA92989 OG1RF_10302 ABC superfamily ATP binding cassette transporter, ABC... 0.03 OrthoFinder
AGT22144 N559_0325, FtsE cell division protein FtsE [Ensembl]. 0.05 OrthoFinder
AGT24833 N559_3173 putative ATP-binding component of a transport system [Ensembl]. 0.05 OrthoFinder
AGT25562 N559_3927, YbbA putative ABC transporter ATP-binding protein YbbA [Ensembl]. 0.05 OrthoFinder
AKP15040 ftsE, WX61_00977 Cell division ATP-binding protein FtsE [Ensembl]. ABC... 0.02 OrthoFinder
CBI66944 lolD, HPB8_1387 lipoprotein-releasing system ATP-binding protein... 0.02 OrthoFinder
CCG26957 No alias ABC transporter ATP-binding protein [Ensembl]. ABC... 0.02 OrthoFinder
CCL17730 BN171_1740005 ABC-type transport system, ATP-binding protein... 0.03 OrthoFinder
CCL19418 BN171_3110011 ABC-type transport system, ATP-binding protein... 0.03 OrthoFinder
CRP22330 lolD_2 Lipoprotein-releasing system ATP-binding protein LolD... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0004109 coproporphyrinogen oxidase activity IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Enrichment
MF GO:0008990 rRNA (guanine-N2-)-methyltransferase activity IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016435 rRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0031167 rRNA methylation IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 27 174
No external refs found!