AAL19818 (STM0882, ybjF)


Aliases : STM0882, ybjF

Description : putative tRNA (uracil-5-)-methyltransferase [Ensembl]. tRNA (Uracil-5-)-methyltransferase [Interproscan].


Gene families : OG_02_0000274 (OrthoFinder) Phylogenetic Tree(s): OG0000274_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL19818
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AAC73946 rlmC, b0859 23S rRNA m(5)U747 methyltransferase, SAM-dependent... 0.1 OrthoFinder
AAK99736 spr0932 Conserved hypothetical protein [Ensembl]. tRNA... 0.02 OrthoFinder
AGT22877 N559_1103, RumA 23S rRNA (uracil-5-)-methyltransferase RumA [Ensembl].... 0.03 OrthoFinder
AGT25043 N559_3390 23S rRNA methyluridine methyltransferase [Ensembl].... 0.08 OrthoFinder
KNA51142 VCV51_031647, RumA 23S rRNA (uracil-5-)-methyltransferase RumA [Ensembl].... 0.04 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEA Interproscan
MF GO:0008173 RNA methyltransferase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003911 DNA ligase (NAD+) activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0008144 drug binding IEP Enrichment
MF GO:0008658 penicillin binding IEP Enrichment
MF GO:0015099 nickel cation transmembrane transporter activity IEP Enrichment
BP GO:0015675 nickel cation transport IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0033293 monocarboxylic acid binding IEP Enrichment
BP GO:0035444 nickel cation transmembrane transport IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042908 xenobiotic transport IEP Enrichment
BP GO:0042919 benzoate transport IEP Enrichment
MF GO:0042925 benzoate transmembrane transporter activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR010280 U5_MeTrfase_fam 208 374
No external refs found!