AAL19917 (STM0983, ycaI)

Aliases : STM0983, ycaI

Description : putative recombination protein [Ensembl]. Competence protein, Metallo-beta-lactamase superfamily, Domain of unknown function (DUF4131) [Interproscan].

Gene families : OG_02_0000404 (OrthoFinder) Phylogenetic Tree(s): OG0000404_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AAL19917
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AAC73999 ycaI, b0913 ComEC family inner membrane protein [Ensembl].... 0.06 OrthoFinder
AGT24994 N559_3338 putative recombination protein with metallo-hydrolase... 0.05 OrthoFinder
CRO46571 No alias ComEC family competence protein [Ensembl]. Competence... 0.04 OrthoFinder
EDJ91216 mutL, CGSHi22421_01819 DNA mismatch repair protein [Ensembl]. Competence... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0006810 transport IEP Enrichment
MF GO:0008740 L-rhamnose isomerase activity IEP Enrichment
BP GO:0009297 pilus assembly IEP Enrichment
MF GO:0015159 polysaccharide transmembrane transporter activity IEP Enrichment
MF GO:0015473 fimbrial usher porin activity IEP Enrichment
BP GO:0015774 polysaccharide transport IEP Enrichment
BP GO:0019299 rhamnose metabolic process IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0022884 macromolecule transmembrane transporter activity IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
CC GO:0030288 outer membrane-bounded periplasmic space IEP Enrichment
CC GO:0042597 periplasmic space IEP Enrichment
BP GO:0043711 pilus organization IEP Enrichment
BP GO:0045229 external encapsulating structure organization IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071555 cell wall organization IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
InterPro domains Description Start Stop
IPR001279 Metallo-B-lactamas 506 675
IPR004477 ComEC_N 201 469
IPR025405 DUF4131 26 157
No external refs found!