AAL20410 (STM1491)


Aliases : STM1491

Description : ABC-type proline/glycine betaine transport system [Ensembl]. CBS domain, ABC transporter [Interproscan].


Gene families : OG_02_0000010 (OrthoFinder) Phylogenetic Tree(s): OG0000010_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL20410
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AAC74523 ydcT, b1441 putative ABC transporter ATPase [Ensembl]. TOBE domain,... 0.04 OrthoFinder
AAC76475 ugpC, b3450 sn-glycerol-3-phosphate ABC transporter ATPase... 0.05 OrthoFinder
AGT24061 N559_2362 ABC transporter, ATP-binding protein [Ensembl]. TOBE... 0.16 OrthoFinder
CCG26977 No alias Multiple sugar ABC transporter, ATP-binding protein... 0.03 OrthoFinder
CPD18723 proV_2, ERS093114_02234 glycine betaine transport ATP-binding protein [Ensembl].... 0.02 OrthoFinder
CRO00959 opuCA Glycine betaine/carnitine/choline transport ATP-binding... 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004096 catalase activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004555 alpha,alpha-trehalase activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005984 disaccharide metabolic process IEP Enrichment
BP GO:0005991 trehalose metabolic process IEP Enrichment
BP GO:0005992 trehalose biosynthetic process IEP Enrichment
BP GO:0006873 cellular ion homeostasis IEP Enrichment
BP GO:0006875 cellular metal ion homeostasis IEP Enrichment
BP GO:0006879 cellular iron ion homeostasis IEP Enrichment
BP GO:0009060 aerobic respiration IEP Enrichment
BP GO:0009311 oligosaccharide metabolic process IEP Enrichment
MF GO:0015927 trehalase activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
BP GO:0019646 aerobic electron transport chain IEP Enrichment
BP GO:0030003 cellular cation homeostasis IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
MF GO:0043022 ribosome binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0046351 disaccharide biosynthetic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0046916 cellular transition metal ion homeostasis IEP Enrichment
BP GO:0055072 iron ion homeostasis IEP Enrichment
BP GO:0055082 cellular chemical homeostasis IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1904949 ATPase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 22 168
IPR000644 CBS_dom 257 306
IPR000644 CBS_dom 326 368
No external refs found!