AAL20412 (STM1493)

Aliases : STM1493

Description : putative periplasmic component [Ensembl]. Substrate binding domain of ABC-type glycine betaine transport system [Interproscan].

Gene families : OG_02_0000079 (OrthoFinder) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AAL20412
Cluster	HCCA: Cluster_27

Target	Alias	Description	ECC score	Gene Family Method
AAC75191	yehY, b2130	putative ABC transporter permease [Ensembl]....	0.06	OrthoFinder
AEA93099	OG1RF_10412	ABC superfamily ATP binding cassette transporter,...	0.04	OrthoFinder
AGT23431	N559_1689	glycine betaine/choline ABC transporter membrane protein...	0.03	OrthoFinder
CCL17066	opuCC, BN171_1180002	ABC-type transport system, glycine...	0.11	OrthoFinder
CPD18769	opuCB, ERS093114_02235	Osmotically activated L-carnitine/choline ABC...	0.11	OrthoFinder
CPD18810	opuCC_2, ERS093114_02236	Osmotically activated L-carnitine/choline ABC...	0.09	OrthoFinder
CRO00991	opuCB_1	Glycine betaine/carnitine/choline transport system...	0.03	OrthoFinder
CRO01052	opuCB_2	Glycine betaine/carnitine/choline transport system...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0022857	transmembrane transporter activity	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0043190	ATP-binding cassette (ABC) transporter complex	IEA	Interproscan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0098533	ATPase dependent transmembrane transport complex	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098797	plasma membrane protein complex	None	Extended
CC	GO:1902495	transmembrane transporter complex	None	Extended
CC	GO:1904949	ATPase complex	None	Extended
CC	GO:1990351	transporter complex	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006091	generation of precursor metabolites and energy	IEP	Enrichment
BP	GO:0009060	aerobic respiration	IEP	Enrichment
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	Enrichment
MF	GO:0016887	ATPase	IEP	Enrichment
BP	GO:0019646	aerobic electron transport chain	IEP	Enrichment
BP	GO:0022900	electron transport chain	IEP	Enrichment
BP	GO:0022904	respiratory electron transport chain	IEP	Enrichment
BP	GO:0045333	cellular respiration	IEP	Enrichment
CC	GO:0070069	cytochrome complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR007210	ABC_Gly_betaine_transp_sub-bd	25	295

External Links

No external refs found!