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AAL20458 (STM1539)


Aliases : STM1539

Description : putative hydrogenase-1 small subunit [Ensembl]. NADH ubiquinone oxidoreductase, NiFe/NiFeSe hydrogenase small subunit C-terminal [Interproscan].


Gene families : OG_02_0001762 (OrthoFinder) Phylogenetic Tree(s): OG0001762_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL20458
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AAC74057 hyaA, b0972 hydrogenase 1, small subunit [Ensembl]. NADH ubiquinone... 0.11 OrthoFinder
AAL20701 STM1786 hydrogenase-1 small subunit [Ensembl]. NADH ubiquinone... 0.13 OrthoFinder
AHY40470 CJ8421_06315 Ni/Fe-hydrogenase small chain [Ensembl]. NADH ubiquinone... 0.02 OrthoFinder
CBI66388 hydA, HPB8_831 Quinone-reactive Ni/Fe hydrogenase, small subunit (HydA)... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
MF GO:0016151 nickel cation binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
InterPro domains Description Start Stop
IPR027394 Cytochrome-c3_hydrogenase_C 227 307
IPR006137 NADH_UbQ_OxRdtase-like_20kDa 62 207
No external refs found!