AAL20506 (STM1588, yncC)


Aliases : STM1588, yncC

Description : putative gntR family regulatory protein [Ensembl]. FCD domain, Bacterial regulatory proteins [Interproscan].


Gene families : OG_02_0000074 (OrthoFinder) Phylogenetic Tree(s): OG0000074_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL20506
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AGT25793 N559_4168, CsiR DNA-binding transcriptional regulator CsiR [Ensembl].... 0.03 OrthoFinder
AKI48603 L2625_00670 transcriptional regulator, GntR family [Ensembl].... 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004096 catalase activity IEP Enrichment
MF GO:0004601 peroxidase activity IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005984 disaccharide metabolic process IEP Enrichment
BP GO:0005991 trehalose metabolic process IEP Enrichment
BP GO:0005992 trehalose biosynthetic process IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
BP GO:0009271 phage shock IEP Enrichment
BP GO:0009312 oligosaccharide biosynthetic process IEP Enrichment
BP GO:0009607 response to biotic stimulus IEP Enrichment
BP GO:0009615 response to virus IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
BP GO:0043207 response to external biotic stimulus IEP Enrichment
BP GO:0046351 disaccharide biosynthetic process IEP Enrichment
BP GO:0051707 response to other organism IEP Enrichment
BP GO:0098586 cellular response to virus IEP Enrichment
InterPro domains Description Start Stop
IPR011711 GntR_C 85 209
IPR000524 Tscrpt_reg_HTH_GntR 13 74
No external refs found!