AAL20536 (STM1618)


Aliases : STM1618

Description : putative DeoR family transcriptional repressor of sgc operon [Ensembl]. DeoR C terminal sensor domain, DeoR-like helix-turn-helix domain [Interproscan].


Gene families : OG_02_0004714 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL20536
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AAC77256 sgcR, b4300 putative DNA-binding transcriptional regulator... 0.12 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
InterPro domains Description Start Stop
IPR001034 DeoR_HTH 8 65
IPR014036 DeoR_C 79 236
No external refs found!