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Aliases : STM1636
Description : putative ABC-type transport system probable membrane spanning protein [Ensembl]. Binding-protein-dependent transport system inner membrane component [Interproscan].
Gene families : OG_02_0000016 (OrthoFinder) Phylogenetic Tree(s): OG0000016_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AAL20554 | |
| Cluster | HCCA: Cluster_33 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAC73754 | gltK, b0653 | glutamate/aspartate ABC transporter permease [Ensembl].... | 0.02 | OrthoFinder | |
| AGT24219 | N559_2537 | glutamine ABC transporter permease component [Ensembl].... | 0.03 | OrthoFinder | |
| AGT25390 | N559_3754 | putative binding-protein-dependent transport systems... | 0.04 | OrthoFinder | |
| CCL18017 | BN171_2030003 | ABC-type transport system, aminoacid-family permease... | 0.02 | OrthoFinder | |
| CCL18564 | BN171_2440005 | ABC-type transport system,cystine/aminoacid-family... | 0.03 | OrthoFinder | |
| CPD30896 | artQ, ERS093114_02521 | extracellular glutamine-binding protein [Ensembl].... | 0.02 | OrthoFinder | |
| CRP60552 | yecS_3 | Inner membrane amino-acid ABC transporter permease... | 0.03 | OrthoFinder | |
| CRP60578 | yecS_4 | Inner membrane amino-acid ABC transporter permease... | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0016020 | membrane | IEA | Interproscan |
| BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005215 | transporter activity | IEP | Enrichment |
| MF | GO:0005283 | amino acid:sodium symporter activity | IEP | Enrichment |
| MF | GO:0005343 | organic acid:sodium symporter activity | IEP | Enrichment |
| MF | GO:0005416 | amino acid:cation symporter activity | IEP | Enrichment |
| BP | GO:0007155 | cell adhesion | IEP | Enrichment |
| BP | GO:0009166 | nucleotide catabolic process | IEP | Enrichment |
| CC | GO:0009289 | pilus | IEP | Enrichment |
| MF | GO:0015175 | neutral amino acid transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015370 | solute:sodium symporter activity | IEP | Enrichment |
| MF | GO:0015655 | alanine:sodium symporter activity | IEP | Enrichment |
| BP | GO:0015804 | neutral amino acid transport | IEP | Enrichment |
| BP | GO:0022610 | biological adhesion | IEP | Enrichment |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0022858 | alanine transmembrane transporter activity | IEP | Enrichment |
| CC | GO:0030288 | outer membrane-bounded periplasmic space | IEP | Enrichment |
| BP | GO:0032328 | alanine transport | IEP | Enrichment |
| CC | GO:0042597 | periplasmic space | IEP | Enrichment |
| CC | GO:0042995 | cell projection | IEP | Enrichment |
| BP | GO:0045229 | external encapsulating structure organization | IEP | Enrichment |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | Enrichment |
| BP | GO:0071555 | cell wall organization | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000515 | MetI-like | 39 | 218 |
| No external refs found! |