Aliases : STM1727, trpA
Description : tryptophan synthase, alpha protein [Ensembl]. Tryptophan synthase alpha chain [Interproscan].
Gene families : OG_02_0000714 (OrthoFinder) Phylogenetic Tree(s): OG0000714_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AAL20645 | |
Cluster | HCCA: Cluster_12 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAC74342 | trpA, b1260 | tryptophan synthase, alpha subunit [Ensembl]. Tryptophan... | 0.08 | OrthoFinder | |
AAL00434 | spr1631, trpA | Tryptophan synthase alpha chain [Ensembl]. Tryptophan... | 0.04 | OrthoFinder | |
AGT24683 | N559_3020 | tryptophan synthase subunit alpha [Ensembl]. | 0.15 | OrthoFinder | |
AHY39605 | trpA, CJ8421_01750 | tryptophan synthase subunit alpha [Ensembl]. Tryptophan... | 0.04 | OrthoFinder | |
AKI49624 | trpA, L2625_01734 | tryptophan synthase, alpha subunit [Ensembl]. Tryptophan... | 0.07 | OrthoFinder | |
CCP44377 | trpA, Rv1613 | Probable tryptophan synthase, alpha subunit TrpA... | 0.04 | OrthoFinder | |
CPC32416 | trpA, ERS093114_00043 | tryptophan synthase subunit alpha [Ensembl]. Tryptophan... | 0.14 | OrthoFinder | |
EDJ91075 | CGSHi22421_10052 | tryptophan synthase subunit alpha [Ensembl]. Tryptophan... | 0.12 | OrthoFinder | |
KNA53894 | VCV51_030823 | tryptophan synthase subunit alpha [Ensembl]. Tryptophan... | 0.06 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004834 | tryptophan synthase activity | IEA | Interproscan |
BP | GO:0006568 | tryptophan metabolic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000105 | histidine biosynthetic process | IEP | Enrichment |
BP | GO:0003333 | amino acid transmembrane transport | IEP | Enrichment |
MF | GO:0003879 | ATP phosphoribosyltransferase activity | IEP | Enrichment |
MF | GO:0004399 | histidinol dehydrogenase activity | IEP | Enrichment |
MF | GO:0004424 | imidazoleglycerol-phosphate dehydratase activity | IEP | Enrichment |
MF | GO:0004425 | indole-3-glycerol-phosphate synthase activity | IEP | Enrichment |
MF | GO:0004635 | phosphoribosyl-AMP cyclohydrolase activity | IEP | Enrichment |
MF | GO:0004640 | phosphoribosylanthranilate isomerase activity | IEP | Enrichment |
BP | GO:0006547 | histidine metabolic process | IEP | Enrichment |
BP | GO:0007154 | cell communication | IEP | Enrichment |
BP | GO:0007267 | cell-cell signaling | IEP | Enrichment |
BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Enrichment |
BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
BP | GO:0009372 | quorum sensing | IEP | Enrichment |
BP | GO:0009595 | detection of biotic stimulus | IEP | Enrichment |
BP | GO:0009607 | response to biotic stimulus | IEP | Enrichment |
BP | GO:0016053 | organic acid biosynthetic process | IEP | Enrichment |
MF | GO:0016757 | glycosyltransferase activity | IEP | Enrichment |
MF | GO:0016763 | pentosyltransferase activity | IEP | Enrichment |
MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Enrichment |
MF | GO:0016846 | carbon-sulfur lyase activity | IEP | Enrichment |
MF | GO:0019238 | cyclohydrolase activity | IEP | Enrichment |
BP | GO:0023052 | signaling | IEP | Enrichment |
MF | GO:0043167 | ion binding | IEP | Enrichment |
MF | GO:0043169 | cation binding | IEP | Enrichment |
MF | GO:0043768 | S-ribosylhomocysteine lyase activity | IEP | Enrichment |
BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
BP | GO:0044283 | small molecule biosynthetic process | IEP | Enrichment |
BP | GO:0044764 | multi-organism cellular process | IEP | Enrichment |
BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Enrichment |
MF | GO:0046872 | metal ion binding | IEP | Enrichment |
BP | GO:0051606 | detection of stimulus | IEP | Enrichment |
BP | GO:0051704 | multi-organism process | IEP | Enrichment |
BP | GO:0060245 | detection of cell density | IEP | Enrichment |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
BP | GO:1903825 | organic acid transmembrane transport | IEP | Enrichment |
BP | GO:1905039 | carboxylic acid transmembrane transport | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002028 | Trp_synthase_suA | 8 | 266 |
No external refs found! |