AAL20645 (STM1727, trpA)

Aliases : STM1727, trpA

Description : tryptophan synthase, alpha protein [Ensembl]. Tryptophan synthase alpha chain [Interproscan].

Gene families : OG_02_0000714 (OrthoFinder) Phylogenetic Tree(s): OG0000714_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AAL20645
Cluster	HCCA: Cluster_12

Target	Alias	Description	ECC score	Gene Family Method
AAC74342	trpA, b1260	tryptophan synthase, alpha subunit [Ensembl]. Tryptophan...	0.08	OrthoFinder
AAL00434	spr1631, trpA	Tryptophan synthase alpha chain [Ensembl]. Tryptophan...	0.04	OrthoFinder
AGT24683	N559_3020	tryptophan synthase subunit alpha [Ensembl].	0.15	OrthoFinder
AHY39605	trpA, CJ8421_01750	tryptophan synthase subunit alpha [Ensembl]. Tryptophan...	0.04	OrthoFinder
AKI49624	trpA, L2625_01734	tryptophan synthase, alpha subunit [Ensembl]. Tryptophan...	0.07	OrthoFinder
CCP44377	trpA, Rv1613	Probable tryptophan synthase, alpha subunit TrpA...	0.04	OrthoFinder
CPC32416	trpA, ERS093114_00043	tryptophan synthase subunit alpha [Ensembl]. Tryptophan...	0.14	OrthoFinder
EDJ91075	CGSHi22421_10052	tryptophan synthase subunit alpha [Ensembl]. Tryptophan...	0.12	OrthoFinder
KNA53894	VCV51_030823	tryptophan synthase subunit alpha [Ensembl]. Tryptophan...	0.06	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004834	tryptophan synthase activity	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006568	tryptophan metabolic process	IEA	Interproscan
BP	GO:0006576	cellular biogenic amine metabolic process	None	Extended
BP	GO:0006586	indolalkylamine metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009072	aromatic amino acid family metabolic process	None	Extended
BP	GO:0009308	amine metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016835	carbon-oxygen lyase activity	None	Extended
MF	GO:0016836	hydro-lyase activity	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042430	indole-containing compound metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044106	cellular amine metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000105	histidine biosynthetic process	IEP	Enrichment
BP	GO:0003333	amino acid transmembrane transport	IEP	Enrichment
MF	GO:0003879	ATP phosphoribosyltransferase activity	IEP	Enrichment
MF	GO:0004399	histidinol dehydrogenase activity	IEP	Enrichment
MF	GO:0004424	imidazoleglycerol-phosphate dehydratase activity	IEP	Enrichment
MF	GO:0004425	indole-3-glycerol-phosphate synthase activity	IEP	Enrichment
MF	GO:0004635	phosphoribosyl-AMP cyclohydrolase activity	IEP	Enrichment
MF	GO:0004640	phosphoribosylanthranilate isomerase activity	IEP	Enrichment
BP	GO:0006547	histidine metabolic process	IEP	Enrichment
BP	GO:0007154	cell communication	IEP	Enrichment
BP	GO:0007267	cell-cell signaling	IEP	Enrichment
BP	GO:0008652	cellular amino acid biosynthetic process	IEP	Enrichment
BP	GO:0009058	biosynthetic process	IEP	Enrichment
BP	GO:0009372	quorum sensing	IEP	Enrichment
BP	GO:0009595	detection of biotic stimulus	IEP	Enrichment
BP	GO:0009607	response to biotic stimulus	IEP	Enrichment
BP	GO:0016053	organic acid biosynthetic process	IEP	Enrichment
MF	GO:0016757	glycosyltransferase activity	IEP	Enrichment
MF	GO:0016763	pentosyltransferase activity	IEP	Enrichment
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	Enrichment
MF	GO:0016846	carbon-sulfur lyase activity	IEP	Enrichment
MF	GO:0019238	cyclohydrolase activity	IEP	Enrichment
BP	GO:0023052	signaling	IEP	Enrichment
MF	GO:0043167	ion binding	IEP	Enrichment
MF	GO:0043169	cation binding	IEP	Enrichment
MF	GO:0043768	S-ribosylhomocysteine lyase activity	IEP	Enrichment
BP	GO:0044249	cellular biosynthetic process	IEP	Enrichment
BP	GO:0044283	small molecule biosynthetic process	IEP	Enrichment
BP	GO:0044764	multi-organism cellular process	IEP	Enrichment
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Enrichment
MF	GO:0046872	metal ion binding	IEP	Enrichment
BP	GO:0051606	detection of stimulus	IEP	Enrichment
BP	GO:0051704	multi-organism process	IEP	Enrichment
BP	GO:0060245	detection of cell density	IEP	Enrichment
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Enrichment
BP	GO:1901576	organic substance biosynthetic process	IEP	Enrichment
BP	GO:1903825	organic acid transmembrane transport	IEP	Enrichment
BP	GO:1905039	carboxylic acid transmembrane transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002028	Trp_synthase_suA	8	266

External Links

No external refs found!

AAL20645 (STM1727, trpA)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation