AAL20645 (STM1727, trpA)


Aliases : STM1727, trpA

Description : tryptophan synthase, alpha protein [Ensembl]. Tryptophan synthase alpha chain [Interproscan].


Gene families : OG_02_0000714 (OrthoFinder) Phylogenetic Tree(s): OG0000714_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL20645
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AAC74342 trpA, b1260 tryptophan synthase, alpha subunit [Ensembl]. Tryptophan... 0.08 OrthoFinder
AAL00434 spr1631, trpA Tryptophan synthase alpha chain [Ensembl]. Tryptophan... 0.04 OrthoFinder
AGT24683 N559_3020 tryptophan synthase subunit alpha [Ensembl]. 0.15 OrthoFinder
AHY39605 trpA, CJ8421_01750 tryptophan synthase subunit alpha [Ensembl]. Tryptophan... 0.04 OrthoFinder
AKI49624 trpA, L2625_01734 tryptophan synthase, alpha subunit [Ensembl]. Tryptophan... 0.07 OrthoFinder
CCP44377 trpA, Rv1613 Probable tryptophan synthase, alpha subunit TrpA... 0.04 OrthoFinder
CPC32416 trpA, ERS093114_00043 tryptophan synthase subunit alpha [Ensembl]. Tryptophan... 0.14 OrthoFinder
EDJ91075 CGSHi22421_10052 tryptophan synthase subunit alpha [Ensembl]. Tryptophan... 0.12 OrthoFinder
KNA53894 VCV51_030823 tryptophan synthase subunit alpha [Ensembl]. Tryptophan... 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004834 tryptophan synthase activity IEA Interproscan
BP GO:0006568 tryptophan metabolic process IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
BP GO:0003333 amino acid transmembrane transport IEP Enrichment
MF GO:0003879 ATP phosphoribosyltransferase activity IEP Enrichment
MF GO:0004399 histidinol dehydrogenase activity IEP Enrichment
MF GO:0004424 imidazoleglycerol-phosphate dehydratase activity IEP Enrichment
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Enrichment
MF GO:0004635 phosphoribosyl-AMP cyclohydrolase activity IEP Enrichment
MF GO:0004640 phosphoribosylanthranilate isomerase activity IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
BP GO:0007154 cell communication IEP Enrichment
BP GO:0007267 cell-cell signaling IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009372 quorum sensing IEP Enrichment
BP GO:0009595 detection of biotic stimulus IEP Enrichment
BP GO:0009607 response to biotic stimulus IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
BP GO:0023052 signaling IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0043768 S-ribosylhomocysteine lyase activity IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0044764 multi-organism cellular process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0051606 detection of stimulus IEP Enrichment
BP GO:0051704 multi-organism process IEP Enrichment
BP GO:0060245 detection of cell density IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR002028 Trp_synthase_suA 8 266
No external refs found!