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Aliases : STM1787
Description : hydrogenase-1 large subunit [Ensembl]. Nickel-dependent hydrogenase [Interproscan].
Gene families : OG_02_0001491 (OrthoFinder) Phylogenetic Tree(s): OG0001491_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AAL20702 | |
| Cluster | HCCA: Cluster_8 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAC74058 | hyaB, b0973 | hydrogenase 1, large subunit [Ensembl]. Nickel-dependent... | 0.38 | OrthoFinder | |
| AAC76030 | hybC, b2994 | hydrogenase 2, large subunit [Ensembl]. Nickel-dependent... | 0.05 | OrthoFinder | |
| AAL20457 | STM1538 | putative hydrogenase-1 large subunit [Ensembl].... | 0.1 | OrthoFinder | |
| AAL22021 | STM3147, hybC | hydrogenase-2, large subunit [Ensembl]. Nickel-dependent... | 0.03 | OrthoFinder | |
| CBI66389 | hydB, HPB8_832 | quinone-reactive Ni/Fe hydrogenase, large subunit (HydB)... | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0016151 | nickel cation binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003725 | double-stranded RNA binding | IEP | Enrichment |
| MF | GO:0003954 | NADH dehydrogenase activity | IEP | Enrichment |
| MF | GO:0003955 | NAD(P)H dehydrogenase (quinone) activity | IEP | Enrichment |
| MF | GO:0008047 | enzyme activator activity | IEP | Enrichment |
| MF | GO:0008137 | NADH dehydrogenase (ubiquinone) activity | IEP | Enrichment |
| MF | GO:0008233 | peptidase activity | IEP | Enrichment |
| MF | GO:0009055 | electron transfer activity | IEP | Enrichment |
| BP | GO:0009060 | aerobic respiration | IEP | Enrichment |
| BP | GO:0015980 | energy derivation by oxidation of organic compounds | IEP | Enrichment |
| MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Enrichment |
| MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | Enrichment |
| BP | GO:0019646 | aerobic electron transport chain | IEP | Enrichment |
| BP | GO:0022904 | respiratory electron transport chain | IEP | Enrichment |
| BP | GO:0045333 | cellular respiration | IEP | Enrichment |
| MF | GO:0048038 | quinone binding | IEP | Enrichment |
| MF | GO:0050136 | NADH dehydrogenase (quinone) activity | IEP | Enrichment |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Enrichment |
| MF | GO:0051540 | metal cluster binding | IEP | Enrichment |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
| CC | GO:0070069 | cytochrome complex | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001501 | Ni-dep_hyd_lsu | 54 | 582 |
| No external refs found! |