AAL20803 (STM1887, yebK)

Aliases : STM1887, yebK

Description : putative transcriptional regulator [Ensembl]. SIS domain, Helix-turn-helix domain [Interproscan].

Gene families : OG_02_0000035 (OrthoFinder) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AAL20803
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AAC74923 yebK, b1853 putative DNA-binding transcriptional regulator... 0.08 OrthoFinder
AEA93030 OG1RF_10343 RpiR family transcriptional regulator [Ensembl]. SIS... 0.05 OrthoFinder
AEA94552 OG1RF_11865 RpiR family phosphosugar-binding transcriptional... 0.03 OrthoFinder
AGT23624 N559_1891, HexR transcriptional regulator HexR [Ensembl].... 0.06 OrthoFinder
AGT24217 N559_2535 putative sugar isomerase [Ensembl]. Helix-turn-helix... 0.02 OrthoFinder
AGT26212 N559_4618 putative helix-turn-helix protein [Ensembl]. SIS domain,... 0.07 OrthoFinder
AGT26243 N559_4649 hypothetical protein [Ensembl]. Helix-turn-helix domain,... 0.06 OrthoFinder
AKI50669 L2625_02883 HTH domain protein [Ensembl]. Sugar isomerase (SIS),... 0.03 OrthoFinder
AKI50732 L2625_02948 phosphosugar-binding transcriptional regulator, RpiR... 0.02 OrthoFinder
CCL18633 BN171_2480008 Transcriptional regulator, RpiR family [Ensembl].... 0.04 OrthoFinder
CCL19496 BN171_3180020 Transcriptional regulator, RpiR family [Ensembl].... 0.02 OrthoFinder
CCL19519 BN171_3190004 Transcriptional regulator, RpiR family [Ensembl].... 0.04 OrthoFinder
CRP05388 ybbH_1 putative HTH-type transcriptional regulator YbbH... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0097367 carbohydrate derivative binding IEA Interproscan
BP GO:1901135 carbohydrate derivative metabolic process IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0001514 selenocysteine incorporation IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0004620 phospholipase activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
BP GO:0006417 regulation of translation IEP Enrichment
BP GO:0006451 translational readthrough IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0010608 posttranscriptional regulation of gene expression IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Enrichment
MF GO:0016662 oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
BP GO:0032268 regulation of cellular protein metabolic process IEP Enrichment
BP GO:0034248 regulation of cellular amide metabolic process IEP Enrichment
MF GO:0042279 nitrite reductase (cytochrome, ammonia-forming) activity IEP Enrichment
MF GO:0043546 molybdopterin cofactor binding IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
MF GO:0098809 nitrite reductase activity IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000281 HTH_RpiR 1 76
IPR001347 SIS_dom 124 252
No external refs found!