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Aliases : STM2094, rfbC
Description : dTDP-4,deoxyrhamnose 3,5 epimerase [Ensembl]. dTDP-4-dehydrorhamnose 3 [Interproscan].
Gene families : OG_02_0000937 (OrthoFinder) Phylogenetic Tree(s): OG0000937_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AAL20998 | |
| Cluster | HCCA: Cluster_20 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAC75099 | rfbC, b2038 | dTDP-4-deoxyrhamnose-3,5-epimerase [Ensembl].... | 0.07 | OrthoFinder | |
| AAK99125 | spr0321, cps2M | The type 2 capsule locus of Streptococcus pneumoniae... | 0.03 | OrthoFinder | |
| AKI49030 | rfbC, L2625_01113 | dTDP-4-dehydrorhamnose 3,5-epimerase [Ensembl].... | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008830 | dTDP-4-dehydrorhamnose 3,5-epimerase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Enrichment |
| MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | Enrichment |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | Enrichment |
| BP | GO:0006304 | DNA modification | IEP | Enrichment |
| BP | GO:0006305 | DNA alkylation | IEP | Enrichment |
| BP | GO:0006306 | DNA methylation | IEP | Enrichment |
| MF | GO:0008170 | N-methyltransferase activity | IEP | Enrichment |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Enrichment |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | Enrichment |
| MF | GO:0008378 | galactosyltransferase activity | IEP | Enrichment |
| BP | GO:0008653 | lipopolysaccharide metabolic process | IEP | Enrichment |
| MF | GO:0008918 | lipopolysaccharide 3-alpha-galactosyltransferase activity | IEP | Enrichment |
| BP | GO:0009103 | lipopolysaccharide biosynthetic process | IEP | Enrichment |
| BP | GO:0016485 | protein processing | IEP | Enrichment |
| MF | GO:0016758 | hexosyltransferase activity | IEP | Enrichment |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Enrichment |
| BP | GO:0032259 | methylation | IEP | Enrichment |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | Enrichment |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Enrichment |
| MF | GO:0035250 | UDP-galactosyltransferase activity | IEP | Enrichment |
| BP | GO:0043414 | macromolecule methylation | IEP | Enrichment |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Enrichment |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Enrichment |
| BP | GO:0044728 | DNA methylation or demethylation | IEP | Enrichment |
| BP | GO:0071586 | CAAX-box protein processing | IEP | Enrichment |
| BP | GO:1903509 | liposaccharide metabolic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000888 | dTDP_sugar_isom | 5 | 176 |
| No external refs found! |