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AAL21001 (STM2097, rfbB)


Aliases : STM2097, rfbB

Description : dTDP-glucose 4,6 dehydratase [Ensembl]. GDP-mannose 4 [Interproscan].


Gene families : OG_02_0000257 (OrthoFinder) Phylogenetic Tree(s): OG0000257_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL21001
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AAK99126 spr0322, cpsN dTDP-glucose-4,6-dehydratase [Ensembl]. GDP-mannose 4... 0.04 OrthoFinder
AEA94419 rmlB, OG1RF_11732 dTDP glucose 4,6-dehydratase [Ensembl]. GDP-mannose 4... 0.02 OrthoFinder
AGT26579 N559_4997 dTDP-glucose 4,6-dehydratase [Ensembl]. NAD(P)-binding... 0.03 OrthoFinder
AHY40342 CJ8421_05650 hypothetical protein [Ensembl]. GDP-mannose 4 [Interproscan]. 0.03 OrthoFinder
AKI49031 rfbB, L2625_01114 dTDP-glucose 4,6-dehydratase [Ensembl]. NAD(P)-binding... 0.03 OrthoFinder
CCL18094 spsJ, BN171_210030 putative dTDP-glucose 4,6-dehydratase [Ensembl].... 0.03 OrthoFinder
EDJ91652 CGSHi22421_07853 dTDP-glucose 46-dehydratase [Ensembl]. GDP-mannose 4... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006304 DNA modification IEP Enrichment
BP GO:0006305 DNA alkylation IEP Enrichment
BP GO:0006306 DNA methylation IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
MF GO:0008378 galactosyltransferase activity IEP Enrichment
BP GO:0008653 lipopolysaccharide metabolic process IEP Enrichment
MF GO:0008830 dTDP-4-dehydrorhamnose 3,5-epimerase activity IEP Enrichment
MF GO:0008918 lipopolysaccharide 3-alpha-galactosyltransferase activity IEP Enrichment
BP GO:0009103 lipopolysaccharide biosynthetic process IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
MF GO:0035250 UDP-galactosyltransferase activity IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
BP GO:0044264 cellular polysaccharide metabolic process IEP Enrichment
BP GO:0044728 DNA methylation or demethylation IEP Enrichment
BP GO:1903509 liposaccharide metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 1 253
No external refs found!