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AAL21053 (STM2150, stcC)


Aliases : STM2150, stcC

Description : putative outer membrane protein [Ensembl]. PapC N-terminal domain, PapC C-terminal domain, Outer membrane usher protein [Interproscan].


Gene families : OG_02_0000166 (OrthoFinder) Phylogenetic Tree(s): OG0000166_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL21053
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AAC73634 sfmD, b0532 putative outer membrane export usher protein [Ensembl].... 0.05 OrthoFinder
AAC74026 elfC, b0940 putative outer membrane fimbrial subunit export usher... 0.03 OrthoFinder
AAC75170 yehB, b2109 putative outer membrane protein [Ensembl]. PapC... 0.04 OrthoFinder
AAL19500 STM0546, fimD outer membrane usher protein [Ensembl]. PapC N-terminal... 0.05 OrthoFinder
AGT23011 N559_1247 fimbrial usher protein [Ensembl]. PapC N-terminal... 0.04 OrthoFinder
AGT24313 N559_2637 fimbrial usher protein [Ensembl]. PapC N-terminal... 0.03 OrthoFinder
AGT25491 N559_3855 fimbrial usher protein [Ensembl]. PapC N-terminal... 0.03 OrthoFinder
AGT26409 N559_4823 putative outer membrane usher protein [Ensembl]. PapC... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0009297 pilus assembly IEA Interproscan
MF GO:0015473 fimbrial usher porin activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004062 aryl sulfotransferase activity IEP Enrichment
MF GO:0005283 amino acid:sodium symporter activity IEP Enrichment
MF GO:0005337 nucleoside transmembrane transporter activity IEP Enrichment
MF GO:0005343 organic acid:sodium symporter activity IEP Enrichment
MF GO:0005416 amino acid:cation symporter activity IEP Enrichment
MF GO:0008146 sulfotransferase activity IEP Enrichment
MF GO:0015081 sodium ion transmembrane transporter activity IEP Enrichment
MF GO:0015171 amino acid transmembrane transporter activity IEP Enrichment
MF GO:0015175 neutral amino acid transmembrane transporter activity IEP Enrichment
MF GO:0015294 solute:cation symporter activity IEP Enrichment
MF GO:0015370 solute:sodium symporter activity IEP Enrichment
MF GO:0015655 alanine:sodium symporter activity IEP Enrichment
BP GO:0015804 neutral amino acid transport IEP Enrichment
BP GO:0015858 nucleoside transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
MF GO:0022858 alanine transmembrane transporter activity IEP Enrichment
CC GO:0030288 outer membrane-bounded periplasmic space IEP Enrichment
BP GO:0032328 alanine transport IEP Enrichment
CC GO:0042597 periplasmic space IEP Enrichment
BP GO:0045229 external encapsulating structure organization IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071555 cell wall organization IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR000015 Fimb_usher 180 746
IPR025885 PapC_N 27 164
IPR025949 PapC-like_C 756 816
No external refs found!