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Aliases : STM2162, yehW
Description : putative ABC-type proline/glycine betaine transport system, permease component [Ensembl]. Binding-protein-dependent transport system inner membrane component [Interproscan].
Gene families : OG_02_0000079 (OrthoFinder) Phylogenetic Tree(s): OG0000079_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AAL21066 | |
| Cluster | HCCA: Cluster_5 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AGT23434 | N559_1692 | glycine betaine/choline ABC transporter membrane protein... | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0016020 | membrane | IEA | Interproscan |
| BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | Enrichment |
| BP | GO:0002097 | tRNA wobble base modification | IEP | Enrichment |
| BP | GO:0002100 | tRNA wobble adenosine to inosine editing | IEP | Enrichment |
| MF | GO:0004000 | adenosine deaminase activity | IEP | Enrichment |
| CC | GO:0005886 | plasma membrane | IEP | Enrichment |
| BP | GO:0006382 | adenosine to inosine editing | IEP | Enrichment |
| BP | GO:0006400 | tRNA modification | IEP | Enrichment |
| BP | GO:0006644 | phospholipid metabolic process | IEP | Enrichment |
| BP | GO:0008033 | tRNA processing | IEP | Enrichment |
| MF | GO:0008251 | tRNA-specific adenosine deaminase activity | IEP | Enrichment |
| BP | GO:0008654 | phospholipid biosynthetic process | IEP | Enrichment |
| BP | GO:0009451 | RNA modification | IEP | Enrichment |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Enrichment |
| BP | GO:0015833 | peptide transport | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| BP | GO:0016553 | base conversion or substitution editing | IEP | Enrichment |
| MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Enrichment |
| MF | GO:0019239 | deaminase activity | IEP | Enrichment |
| BP | GO:0042886 | amide transport | IEP | Enrichment |
| BP | GO:0043412 | macromolecule modification | IEP | Enrichment |
| MF | GO:0043772 | acyl-phosphate glycerol-3-phosphate acyltransferase activity | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000515 | MetI-like | 2 | 129 |
| No external refs found! |