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AAL21076 (STM2172, yohG)


Aliases : STM2172, yohG

Description : putative outer membrane efflux protein [Ensembl]. Outer membrane efflux protein [Interproscan].


Gene families : OG_02_0000126 (OrthoFinder) Phylogenetic Tree(s): OG0000126_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL21076
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AAD13463 mdtP, b4080 outer membrane factor of efflux pump [Ensembl]. Outer... 0.11 OrthoFinder
AGT26161 N559_4560, CusC Cation efflux system protein CusC [Ensembl]. 0.05 OrthoFinder
AGT26874 N559_5300, CusC Cation efflux system protein CusC [Ensembl]. 0.03 OrthoFinder
AKP14427 oprM, WX61_00345 Outer membrane protein OprM precursor [Ensembl]. Outer... 0.02 OrthoFinder
CRO09433 oprM_2 Outer membrane protein OprM precursor [Ensembl]. Outer... 0.02 OrthoFinder
CRO88249 oprM_3 Outer membrane protein OprM precursor [Ensembl]. Outer... 0.02 OrthoFinder
CRP22942 oprM_4 Outer membrane protein OprM precursor [Ensembl]. Outer... 0.03 OrthoFinder
CRP32562 oprM_5 Outer membrane protein OprM precursor [Ensembl]. Outer... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0015562 efflux transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003911 DNA ligase (NAD+) activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006814 sodium ion transport IEP Enrichment
MF GO:0008740 L-rhamnose isomerase activity IEP Enrichment
BP GO:0009297 pilus assembly IEP Enrichment
MF GO:0015473 fimbrial usher porin activity IEP Enrichment
BP GO:0019299 rhamnose metabolic process IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
CC GO:0030288 outer membrane-bounded periplasmic space IEP Enrichment
BP GO:0043711 pilus organization IEP Enrichment
BP GO:0045229 external encapsulating structure organization IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071555 cell wall organization IEP Enrichment
InterPro domains Description Start Stop
IPR003423 OMP_efflux 294 445
IPR003423 OMP_efflux 67 266
No external refs found!