AAL21127 (STM2224, rplY)


Aliases : STM2224, rplY

Description : 50S ribosomal subunit protein L25 [Ensembl]. Ribosomal L25p family [Interproscan].


Gene families : OG_02_0000710 (OrthoFinder) Phylogenetic Tree(s): OG0000710_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL21127
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AAC75246 rplY, b2185 50S ribosomal subunit protein L25 [Ensembl]. Ribosomal... 0.28 OrthoFinder
AGT23381 N559_1635 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5... 0.16 OrthoFinder
AHY39565 CJ8421_01540 50S ribosomal protein L25/general stress protein Ctc... 0.27 OrthoFinder
AKP15816 rplY, WX61_01784 50S ribosomal protein L25 [Ensembl]. Ribosomal protein... 0.03 OrthoFinder
CBI65591 rplY, HPB8_34 large subunit ribosomal protein L25 [Ensembl]. Ribosomal... 0.03 OrthoFinder
CCP43765 rplY, Rv1015c 50S ribosomal protein L25 RplY [Ensembl]. Ribosomal... 0.02 OrthoFinder
CPD35474 rplY, ERS093114_02652 50S ribosomal protein L25 [Ensembl]. Ribosomal L25p... 0.1 OrthoFinder
CRO62512 rplY General stress protein CTC [Ensembl]. Ribosomal L25p... 0.23 OrthoFinder
EDJ90895 CGSHi22421_03563 50S ribosomal protein L25 [Ensembl]. Ribosomal L25p... 0.1 OrthoFinder
KNA58241 VCV51_031088 ribosomal L25p family protein [Ensembl]. Ribosomal L25p... 0.26 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
MF GO:0008097 5S rRNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004127 cytidylate kinase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0050145 nucleoside monophosphate kinase activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
InterPro domains Description Start Stop
IPR029751 Ribosomal_L25 4 91
No external refs found!