AAL21469 (STM2575)

Aliases : STM2575

Description : putative LysR family transcriptional regulator [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].

Gene families : OG_02_0000002 (OrthoFinder) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AAL21469
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AAC75458 xapR, b2405 transcriptional activator of xapAB [Ensembl]. LysR... 0.04 OrthoFinder
AAC75958 ygfI, b2921 putative DNA-binding transcriptional regulator... 0.03 OrthoFinder
AAC76609 yiaU, b3585 putative DNA-binding transcriptional regulator... 0.04 OrthoFinder
CCL20714 BN171_960006 LysR family transcriptional regulator [Ensembl]. LysR... 0.03 OrthoFinder
CRN79690 gbpR_1 Galactose-binding protein regulator [Ensembl]. LysR... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR000847 Tscrpt_reg_HTH_LysR 3 61
IPR005119 LysR_subst-bd 87 285
No external refs found!