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  5. AAL21533

AAL21533 (STM2639, rseA)


Aliases : STM2639, rseA

Description : anti sigma E (sigma 24) factor, negative regulator [Ensembl]. Anti sigma-E protein RseA [Interproscan].


Gene families : OG_02_0001941 (OrthoFinder) Phylogenetic Tree(s): OG0001941_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL21533
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AAC75625 rseA, b2572 anti-sigma factor [Ensembl]. Anti sigma-E protein RseA... 0.17 OrthoFinder
AGT23118 N559_1356, SigE anti-RNA polymerase sigma factor SigE [Ensembl].... 0.1 OrthoFinder
EDJ89962 CGSHi22421_05777 hypothetical protein [Ensembl]. Anti sigma-E protein... 0.09 OrthoFinder
EDJ89963 CGSHi22421_05782 RNA polymerase sigma factor RpoE [Ensembl]. Anti sigma-E... 0.1 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016989 sigma factor antagonist activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
MF GO:0015171 amino acid transmembrane transporter activity IEP Enrichment
MF GO:0015658 branched-chain amino acid transmembrane transporter activity IEP Enrichment
BP GO:0015803 branched-chain amino acid transport IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
MF GO:0016987 sigma factor activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055070 copper ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
InterPro domains Description Start Stop
IPR005572 Anti-sigma_E_RseA_N 1 87
IPR005573 Anti-sigma_E_RseA_C 132 186
No external refs found!