AAL21550 (STM2660, clpB)

Aliases : STM2660, clpB

Description : ATP-dependent protease [Ensembl]. C-terminal, AAA lid domain, Clp amino terminal domain, AAA domain (Cdc48 subfamily), ATPase family associated with various cellular activities (AAA) [Interproscan].

Gene families : OG_02_0000042 (OrthoFinder) Phylogenetic Tree(s): OG0000042_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AAL21550
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AAC75641 clpB, b2592 protein disaggregation chaperone [Ensembl]. C-terminal,... 0.2 OrthoFinder
AAK99111 spr0307, clpL ATP-dependent protease ATP-binding subunit [Ensembl].... 0.03 OrthoFinder
AAK99529 spr0725, clpE ATP dependent protease [Ensembl]. C-terminal, AAA lid... 0.02 OrthoFinder
ADK87250 clpB, MPNE_0627 chaperone protein ClpB [Ensembl]. AAA lid domain, ATPase... 0.04 OrthoFinder
AEA93131 clpE, OG1RF_10444 ATP-dependent Clp protease [Ensembl]. C-terminal, AAA... 0.04 OrthoFinder
AEA94480 clpB, OG1RF_11793 chaperone protein ClpB [Ensembl]. C-terminal, AAA lid... 0.04 OrthoFinder
AGT23103 N559_1341 protein disaggregation chaperone [Ensembl]. D2-small... 0.22 OrthoFinder
AHY39751 CJ8421_02500 ATP-dependent chaperone protein ClpB [Ensembl].... 0.05 OrthoFinder
AKI48945 clpE, L2625_01027 ATP-dependent Clp protease, ATP-binding subunit... 0.04 OrthoFinder
AKI50204 clpB, L2625_02371 ATP-dependent Clp protease, ATP-binding subunit... 0.05 OrthoFinder
AKP15926 clpB, WX61_01896 Chaperone protein ClpB [Ensembl]. C-terminal, AAA lid... 0.05 OrthoFinder
CCG26873 ClpE ATP-dependent Clp protease, ATP-binding subunit ClpE... 0.06 OrthoFinder
CCG27087 No alias putative ATP-dependent Clp proteinase (ATP-binding... 0.07 OrthoFinder
CPC44266 clpB_1, ERS093114_00454 chaperone protein ClpB [Ensembl]. C-terminal, AAA lid... 0.06 OrthoFinder
CPC57876 clpC, ERS093114_00855 endopeptidase Clp ATP-binding subunit C [Ensembl].... 0.06 OrthoFinder
CRN66395 clpB_1 Heat shock protein F84.1 [Ensembl]. C-terminal, AAA lid... 0.11 OrthoFinder
EDJ91635 CGSHi22421_07768 hypothetical protein [Ensembl]. C-terminal, AAA lid... 0.15 OrthoFinder
KNA57481 VCV51_030464, ClpB ATP-dependent chaperone ClpB [Ensembl]. C-terminal, AAA... 0.09 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Enrichment
BP GO:0002376 immune system process IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004176 ATP-dependent peptidase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006952 defense response IEP Enrichment
BP GO:0006955 immune response IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
BP GO:0009307 DNA restriction-modification system IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
BP GO:0032954 regulation of cytokinetic process IEP Enrichment
BP GO:0032955 regulation of division septum assembly IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0042803 protein homodimerization activity IEP Enrichment
BP GO:0043207 response to external biotic stimulus IEP Enrichment
BP GO:0044087 regulation of cellular component biogenesis IEP Enrichment
BP GO:0044355 clearance of foreign intracellular DNA IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
BP GO:0051707 response to other organism IEP Enrichment
BP GO:0051726 regulation of cell cycle IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
BP GO:0098542 defense response to other organism IEP Enrichment
BP GO:0099046 clearance of foreign intracellular nucleic acids IEP Enrichment
BP GO:1901891 regulation of cell septum assembly IEP Enrichment
InterPro domains Description Start Stop
IPR004176 Clp_R_dom 17 68
IPR004176 Clp_R_dom 94 145
IPR003959 ATPase_AAA_core 203 337
IPR019489 Clp_ATPase_C 766 845
IPR003959 ATPase_AAA_core 596 760
IPR041546 ClpA/ClpB_AAA_lid 342 443
No external refs found!