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  5. AAL21743

AAL21743 (STM2863, sitC)


Aliases : STM2863, sitC

Description : fur regulated Salmonella iron transporter [Ensembl]. ABC 3 transport family [Interproscan].


Gene families : OG_02_0000141 (OrthoFinder) Phylogenetic Tree(s): OG0000141_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL21743
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AAC74929 znuB, b1859 zinc ABC transporter permease [Ensembl]. ABC 3 transport... 0.02 OrthoFinder
AAL00297 spr1493, psaC ABC transporter membrane-spanning permease-manganese... 0.03 OrthoFinder
AEA94365 OG1RF_11678 ABC superfamily ATP binding cassette transporter,... 0.03 OrthoFinder
AGT22922 N559_1153 iron transporter: fur regulated [Ensembl]. ABC 3... 0.14 OrthoFinder
AGT22923 N559_1154 iron transport system inner membrane permease component... 0.14 OrthoFinder
AGT22969 N559_1203 putative ABC transport system permease component... 0.03 OrthoFinder
AKI48124 L2625_00151 zinc ABC transporter, permease protein [Ensembl]. ABC... 0.02 OrthoFinder
AKI49843 mntC, L2625_01990 manganese ABC transporter, permease protein [Ensembl].... 0.04 OrthoFinder
AKP15480 mntB, WX61_01434 Manganese transport system membrane protein MntB... 0.03 OrthoFinder
CPC53217 sitD, ERS093114_00721 Manganese ABC transporter%2C inner membrane permease... 0.05 OrthoFinder
CRO76540 znuB_1 High-affinity zinc uptake system membrane protein ZnuB... 0.03 OrthoFinder
EDJ90086 CGSHi22421_06568 iron (chelated) ABC transporter permease protein... 0.04 OrthoFinder
EDJ90087 CGSHi22421_06573 iron (chelated) ABC transporter permease protein... 0.03 OrthoFinder
KNA59605 VCV51_031395 zinc ABC transporter permease [Ensembl]. ABC 3 transport... 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005887 integral component of plasma membrane IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
MF GO:0004109 coproporphyrinogen oxidase activity IEP Enrichment
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0006826 iron ion transport IEP Enrichment
MF GO:0008849 enterochelin esterase activity IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001626 ABC_TroCD 10 264
No external refs found!