AAL21789 (STM2909, mutS)


Aliases : STM2909, mutS

Description : methyl-directed mismatch repair [Ensembl]. MutS domain V, MutS domain III, MutS family domain IV [Interproscan].


Gene families : OG_02_0000582 (OrthoFinder) Phylogenetic Tree(s): OG0000582_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL21789
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AAC75775 mutS, b2733 methyl-directed mismatch repair protein [Ensembl]. MutS... 0.1 OrthoFinder
AAL00690 spr1888, hexA DNA mismatch repair protein HexA [Ensembl]. MutS domain... 0.03 OrthoFinder
AGT22910 N559_1140, MutS DNA mismatch repair protein MutS [Ensembl]. MutS domain... 0.09 OrthoFinder
AKI49400 mutS, L2625_01500 DNA mismatch repair protein [Ensembl]. DNA mismatch... 0.03 OrthoFinder
AKP15033 mutS, WX61_00970 DNA mismatch repair protein MutS [Ensembl]. MutS domain... 0.02 OrthoFinder
CPD07729 mutS_2, ERS093114_02001 MutS-related protein%2C family 1 [Ensembl]. MutS domain... 0.02 OrthoFinder
EDJ90359 CGSHi22421_09935 DNA mismatch repair protein [Ensembl]. MutS domain V,... 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006298 mismatch repair IEA Interproscan
MF GO:0030983 mismatched DNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003919 FMN adenylyltransferase activity IEP Enrichment
MF GO:0004107 chorismate synthase activity IEP Enrichment
MF GO:0004363 glutathione synthase activity IEP Enrichment
MF GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity IEP Enrichment
MF GO:0004832 valine-tRNA ligase activity IEP Enrichment
MF GO:0004857 enzyme inhibitor activity IEP Enrichment
MF GO:0004866 endopeptidase inhibitor activity IEP Enrichment
MF GO:0005451 monovalent cation:proton antiporter activity IEP Enrichment
CC GO:0005615 extracellular space IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006438 valyl-tRNA aminoacylation IEP Enrichment
BP GO:0006749 glutathione metabolic process IEP Enrichment
BP GO:0006750 glutathione biosynthetic process IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008531 riboflavin kinase activity IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
MF GO:0008882 [glutamate-ammonia-ligase] adenylyltransferase activity IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009435 NAD biosynthetic process IEP Enrichment
MF GO:0015385 sodium:proton antiporter activity IEP Enrichment
MF GO:0015491 cation:cation antiporter activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0019184 nonribosomal peptide biosynthetic process IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
MF GO:0030414 peptidase inhibitor activity IEP Enrichment
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
MF GO:0051139 metal ion:proton antiporter activity IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
MF GO:0061134 peptidase regulator activity IEP Enrichment
MF GO:0061135 endopeptidase regulator activity IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR007861 DNA_mismatch_repair_MutS_clamp 430 519
IPR007860 DNA_mmatch_repair_MutS_con_dom 133 258
IPR007696 DNA_mismatch_repair_MutS_core 274 561
IPR007695 DNA_mismatch_repair_MutS-lik_N 13 124
IPR000432 DNA_mismatch_repair_MutS_C 612 799
No external refs found!