- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : STM2943
Description : putative cytoplasmic protein [Ensembl]. CRISPR-associated protein Cse1 (CRISPR_cse1) [Interproscan].
Gene families : OG_02_0004654 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AAL21823 | |
| Cluster | HCCA: Cluster_25 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAC75802 | casA, b2760 | CRISP RNA (crRNA) containing Cascade antiviral complex... | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0002376 | immune system process | IEP | Enrichment |
| MF | GO:0004590 | orotidine-5'-phosphate decarboxylase activity | IEP | Enrichment |
| BP | GO:0006207 | 'de novo' pyrimidine nucleobase biosynthetic process | IEP | Enrichment |
| BP | GO:0006952 | defense response | IEP | Enrichment |
| BP | GO:0006955 | immune response | IEP | Enrichment |
| BP | GO:0007155 | cell adhesion | IEP | Enrichment |
| MF | GO:0008671 | 2-dehydro-3-deoxygalactonokinase activity | IEP | Enrichment |
| CC | GO:0009289 | pilus | IEP | Enrichment |
| BP | GO:0009615 | response to virus | IEP | Enrichment |
| BP | GO:0016032 | viral process | IEP | Enrichment |
| BP | GO:0019058 | viral life cycle | IEP | Enrichment |
| BP | GO:0019068 | virion assembly | IEP | Enrichment |
| MF | GO:0019200 | carbohydrate kinase activity | IEP | Enrichment |
| BP | GO:0019520 | aldonic acid metabolic process | IEP | Enrichment |
| BP | GO:0019583 | galactonate metabolic process | IEP | Enrichment |
| BP | GO:0019584 | galactonate catabolic process | IEP | Enrichment |
| BP | GO:0022610 | biological adhesion | IEP | Enrichment |
| BP | GO:0034192 | D-galactonate metabolic process | IEP | Enrichment |
| BP | GO:0034194 | D-galactonate catabolic process | IEP | Enrichment |
| CC | GO:0042995 | cell projection | IEP | Enrichment |
| BP | GO:0043207 | response to external biotic stimulus | IEP | Enrichment |
| BP | GO:0043570 | maintenance of DNA repeat elements | IEP | Enrichment |
| BP | GO:0043571 | maintenance of CRISPR repeat elements | IEP | Enrichment |
| BP | GO:0044275 | cellular carbohydrate catabolic process | IEP | Enrichment |
| BP | GO:0046176 | aldonic acid catabolic process | IEP | Enrichment |
| BP | GO:0051607 | defense response to virus | IEP | Enrichment |
| BP | GO:0051707 | response to other organism | IEP | Enrichment |
| BP | GO:0072329 | monocarboxylic acid catabolic process | IEP | Enrichment |
| BP | GO:0098542 | defense response to other organism | IEP | Enrichment |
| BP | GO:0140546 | defense response to symbiont | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013381 | CRISPR-assoc_prot_Cse1 | 6 | 466 |
| No external refs found! |