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  5. AAL21974

AAL21974 (STM3099, yggR)


Aliases : STM3099, yggR

Description : putative protein transport [Ensembl]. Type II/IV secretion system protein [Interproscan].


Gene families : OG_02_0000073 (OrthoFinder) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL21974
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AAC75987 yggR, b2950 putative PilT family AAA+ ATPase [Ensembl]. Type II/IV... 0.1 OrthoFinder
AGT22638 N559_0849 twitching motility protein [Ensembl]. 0.07 OrthoFinder
AGT25933 N559_4320 hypothetical protein [Ensembl]. N-terminal domain [InterProScan]. 0.04 OrthoFinder
CRN95468 epsE_2 Type II traffic warden ATPase [Ensembl]. Type II/IV... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003911 DNA ligase (NAD+) activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006814 sodium ion transport IEP Enrichment
BP GO:0008645 hexose transmembrane transport IEP Enrichment
MF GO:0008740 L-rhamnose isomerase activity IEP Enrichment
BP GO:0009297 pilus assembly IEP Enrichment
MF GO:0015149 hexose transmembrane transporter activity IEP Enrichment
MF GO:0015153 rhamnose transmembrane transporter activity IEP Enrichment
MF GO:0015159 polysaccharide transmembrane transporter activity IEP Enrichment
MF GO:0015473 fimbrial usher porin activity IEP Enrichment
BP GO:0015774 polysaccharide transport IEP Enrichment
BP GO:0019299 rhamnose metabolic process IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0022884 macromolecule transmembrane transporter activity IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
BP GO:0043711 pilus organization IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR001482 T2SS/T4SS 118 259
No external refs found!