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AAL22083 (STM3209, rpsU)


Aliases : STM3209, rpsU

Description : 30S ribosomal subunit protein S21 [Ensembl]. Ribosomal protein S21 [Interproscan].


Gene families : OG_02_0000673 (OrthoFinder) Phylogenetic Tree(s): OG0000673_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL22083
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AAC76101 rpsU, b3065 30S ribosomal subunit protein S21 [Ensembl]. Ribosomal... 0.19 OrthoFinder
AEA94535 rpsU, OG1RF_11848 30S ribosomal protein S21 [Ensembl]. Ribosomal protein... 0.07 OrthoFinder
AGT22497 N559_0702 ribosomal protein S21 [Ensembl]. 0.05 OrthoFinder
AKP15278 rpsU, WX61_01229 30S ribosomal protein S21 [Ensembl]. Ribosomal protein... 0.03 OrthoFinder
CCG26598 No alias SSU ribosomal protein S21p [Ensembl]. Ribosomal protein... 0.02 OrthoFinder
CCL18860 rpsU, BN171_2690017 30S ribosomal protein S21 [Ensembl]. Ribosomal protein... 0.04 OrthoFinder
CPC82226 rpsU, ERS093114_01405 30S ribosomal protein S21 [Ensembl]. Ribosomal protein... 0.05 OrthoFinder
CRO83709 rpsU 30S ribosomal protein S21 [Ensembl]. Ribosomal protein... 0.09 OrthoFinder
EDJ91463 CGSHi22421_06827 DNA primase [Ensembl]. Ribosomal protein S21 [Interproscan]. 0.08 OrthoFinder
KNA49206 VCV51_033802 ribosomal protein S21 [Ensembl]. Ribosomal protein S21... 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
InterPro domains Description Start Stop
IPR001911 Ribosomal_S21 4 56
No external refs found!