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Aliases : STM3321, yhbH
Description : putative sigma N modulation factor [Ensembl]. Sigma 54 modulation protein / S30EA ribosomal protein [Interproscan].
Gene families : OG_02_0000405 (OrthoFinder) Phylogenetic Tree(s): OG0000405_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AAL22190 | |
| Cluster | HCCA: Cluster_35 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAC75646 | raiA, b2597 | cold shock protein associated with 30S ribosomal subunit... | 0.05 | OrthoFinder | |
| AAC76235 | hpf, b3203 | ribosome hibernation promoting factor HPF; stabilizes... | 0.07 | OrthoFinder | |
| AEA94164 | yfiA, OG1RF_11477 | ribosomal subunit interface protein [Ensembl]. Sigma 54... | 0.03 | OrthoFinder | |
| AGT22352 | N559_0554 | putative sigma(54) modulation protein [Ensembl]. | 0.03 | OrthoFinder | |
| AGT23098 | N559_1336 | sigma-54 modulation protein [Ensembl]. | 0.06 | OrthoFinder | |
| KNA55034 | VCV51_031707 | sigma 54 modulation protein/S30EA ribosomal protein... | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0044238 | primary metabolic process | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001216 | DNA-binding transcription activator activity | IEP | Enrichment |
| BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Enrichment |
| BP | GO:0010564 | regulation of cell cycle process | IEP | Enrichment |
| MF | GO:0016987 | sigma factor activity | IEP | Enrichment |
| BP | GO:0032954 | regulation of cytokinetic process | IEP | Enrichment |
| BP | GO:0032955 | regulation of division septum assembly | IEP | Enrichment |
| BP | GO:0044087 | regulation of cellular component biogenesis | IEP | Enrichment |
| BP | GO:0051128 | regulation of cellular component organization | IEP | Enrichment |
| BP | GO:0051301 | cell division | IEP | Enrichment |
| BP | GO:0051726 | regulation of cell cycle | IEP | Enrichment |
| BP | GO:1901891 | regulation of cell septum assembly | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003489 | RHF/RaiA | 3 | 93 |
| No external refs found! |