AAL22259 (STM3390, acrE)


Aliases : STM3390, acrE

Description : transmembrane protein affecting septum formation and cell membrane permeability [Ensembl]. HlyD membrane-fusion protein of T1SS, Barrel-sandwich domain of CusB or HlyD membrane-fusion [Interproscan].


Gene families : OG_02_0000068 (OrthoFinder) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAL22259
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AAC76297 acrE, b3265 cytoplasmic membrane lipoprotein [Ensembl]. HlyD... 0.05 OrthoFinder
AGT21931 N559_0105 EefA [Ensembl]. Barrel-sandwich domain of CusB or HlyD... 0.07 OrthoFinder
AGT25400 N559_3764, HlyD putative secretion protein HlyD [Ensembl].... 0.03 OrthoFinder
AKP14429 mexA, WX61_00347 Multidrug resistance protein MexA precursor [Ensembl].... 0.02 OrthoFinder
CRO09488 bepF_1 Efflux pump periplasmic linker BepF [Ensembl].... 0.02 OrthoFinder
CRO58950 bepF_2 Efflux pump periplasmic linker BepF [Ensembl].... 0.04 OrthoFinder
CRO88312 mexA_1 Multidrug resistance protein MexA precursor [Ensembl].... 0.02 OrthoFinder
CRP32469 mdtA_3 Multidrug transporter MdtA [Ensembl]. Biotin-lipoyl... 0.01 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003911 DNA ligase (NAD+) activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
MF GO:0008740 L-rhamnose isomerase activity IEP Enrichment
BP GO:0009297 pilus assembly IEP Enrichment
MF GO:0015473 fimbrial usher porin activity IEP Enrichment
BP GO:0019299 rhamnose metabolic process IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
CC GO:0030288 outer membrane-bounded periplasmic space IEP Enrichment
BP GO:0043711 pilus organization IEP Enrichment
BP GO:0045229 external encapsulating structure organization IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071555 cell wall organization IEP Enrichment
InterPro domains Description Start Stop
IPR032317 HlyD_D23 63 292
IPR006143 RND_pump_MFP 293 359
No external refs found!