Aliases : STM3390, acrE
Description : transmembrane protein affecting septum formation and cell membrane permeability [Ensembl]. HlyD membrane-fusion protein of T1SS, Barrel-sandwich domain of CusB or HlyD membrane-fusion [Interproscan].
Gene families : OG_02_0000068 (OrthoFinder) Phylogenetic Tree(s): OG0000068_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AAL22259 | |
Cluster | HCCA: Cluster_36 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAC76297 | acrE, b3265 | cytoplasmic membrane lipoprotein [Ensembl]. HlyD... | 0.05 | OrthoFinder | |
AGT21931 | N559_0105 | EefA [Ensembl]. Barrel-sandwich domain of CusB or HlyD... | 0.07 | OrthoFinder | |
AGT25400 | N559_3764, HlyD | putative secretion protein HlyD [Ensembl].... | 0.03 | OrthoFinder | |
AKP14429 | mexA, WX61_00347 | Multidrug resistance protein MexA precursor [Ensembl].... | 0.02 | OrthoFinder | |
CRO09488 | bepF_1 | Efflux pump periplasmic linker BepF [Ensembl].... | 0.02 | OrthoFinder | |
CRO58950 | bepF_2 | Efflux pump periplasmic linker BepF [Ensembl].... | 0.04 | OrthoFinder | |
CRO88312 | mexA_1 | Multidrug resistance protein MexA precursor [Ensembl].... | 0.02 | OrthoFinder | |
CRP32469 | mdtA_3 | Multidrug transporter MdtA [Ensembl]. Biotin-lipoyl... | 0.01 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0016020 | membrane | IEA | Interproscan |
MF | GO:0022857 | transmembrane transporter activity | IEA | Interproscan |
BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003909 | DNA ligase activity | IEP | Enrichment |
MF | GO:0003911 | DNA ligase (NAD+) activity | IEP | Enrichment |
BP | GO:0005975 | carbohydrate metabolic process | IEP | Enrichment |
BP | GO:0005996 | monosaccharide metabolic process | IEP | Enrichment |
MF | GO:0008740 | L-rhamnose isomerase activity | IEP | Enrichment |
BP | GO:0009297 | pilus assembly | IEP | Enrichment |
MF | GO:0015473 | fimbrial usher porin activity | IEP | Enrichment |
BP | GO:0019299 | rhamnose metabolic process | IEP | Enrichment |
BP | GO:0019318 | hexose metabolic process | IEP | Enrichment |
BP | GO:0030030 | cell projection organization | IEP | Enrichment |
BP | GO:0030031 | cell projection assembly | IEP | Enrichment |
CC | GO:0030288 | outer membrane-bounded periplasmic space | IEP | Enrichment |
BP | GO:0043711 | pilus organization | IEP | Enrichment |
BP | GO:0045229 | external encapsulating structure organization | IEP | Enrichment |
BP | GO:0071554 | cell wall organization or biogenesis | IEP | Enrichment |
BP | GO:0071555 | cell wall organization | IEP | Enrichment |
No external refs found! |