AAL22298 (STM3435, rplV)

Aliases : STM3435, rplV

Description : 50S ribosomal subunit protein L22 [Ensembl]. Ribosomal protein L22p/L17e [Interproscan].

Gene families : OG_02_0000485 (OrthoFinder) Phylogenetic Tree(s): OG0000485_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AAL22298
Cluster	HCCA: Cluster_23

Target	Alias	Description	ECC score	Gene Family Method
AAC76340	rplV, b3315	50S ribosomal subunit protein L22 [Ensembl]. Ribosomal...	0.59	OrthoFinder
AAK98998	spr0194, rplV	50S Ribosomal protein L22 [Ensembl]. Ribosomal protein...	0.25	OrthoFinder
ADK86723	rplV, MPNE_0199	ribosomal protein L22 [Ensembl]. Ribosomal protein...	0.17	OrthoFinder
AEA92843	rplV, OG1RF_10156	50S ribosomal protein L22 [Ensembl]. Ribosomal protein...	0.28	OrthoFinder
AHY40887	rplV, CJ8421_08575	50S ribosomal protein L22 [Ensembl]. Ribosomal protein...	0.4	OrthoFinder
AKI50562	rplV, L2625_02772	ribosomal protein L22 [Ensembl]. Ribosomal protein...	0.11	OrthoFinder
CBI65722	rplV, HPB8_165	large subunit ribosomal protein L22 [Ensembl]. Ribosomal...	0.25	OrthoFinder
CCG27384	No alias	LSU ribosomal protein L22p (L17e) [Ensembl]. Ribosomal...	0.22	OrthoFinder
CCL20568	rplV, BN171_70008	50S ribosomal protein L22 [Ensembl]. Ribosomal protein...	0.27	OrthoFinder
CCP43450	rplV, Rv0706	50S ribosomal protein L22 RplV [Ensembl]. Ribosomal...	0.15	OrthoFinder
CPD13670	rplV, ERS093114_02127	50S ribosomal protein L22 [Ensembl]. Ribosomal protein...	0.37	OrthoFinder
CRO73906	rplV	50S ribosomal protein L22 [Ensembl]. Ribosomal protein...	0.23	OrthoFinder
EDJ91359	rplB, CGSHi22421_04628	50S ribosomal protein L2 [Ensembl]. Ribosomal protein...	0.32	OrthoFinder
KNA54977	VCV51_033160	ribosomal protein L22 [Ensembl]. Ribosomal protein...	0.29	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0003723	RNA binding	IEP	Enrichment
MF	GO:0003746	translation elongation factor activity	IEP	Enrichment
MF	GO:0003924	GTPase activity	IEP	Enrichment
MF	GO:0004127	cytidylate kinase activity	IEP	Enrichment
MF	GO:0005525	GTP binding	IEP	Enrichment
BP	GO:0006364	rRNA processing	IEP	Enrichment
BP	GO:0006396	RNA processing	IEP	Enrichment
MF	GO:0008097	5S rRNA binding	IEP	Enrichment
BP	GO:0008104	protein localization	IEP	Enrichment
MF	GO:0008135	translation factor activity, RNA binding	IEP	Enrichment
BP	GO:0015031	protein transport	IEP	Enrichment
BP	GO:0016070	RNA metabolic process	IEP	Enrichment
BP	GO:0016072	rRNA metabolic process	IEP	Enrichment
MF	GO:0016462	pyrophosphatase activity	IEP	Enrichment
MF	GO:0016776	phosphotransferase activity, phosphate group as acceptor	IEP	Enrichment
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Enrichment
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Enrichment
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Enrichment
MF	GO:0019001	guanyl nucleotide binding	IEP	Enrichment
MF	GO:0019205	nucleobase-containing compound kinase activity	IEP	Enrichment
MF	GO:0019843	rRNA binding	IEP	Enrichment
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Enrichment
BP	GO:0031554	regulation of DNA-templated transcription, termination	IEP	Enrichment
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Enrichment
BP	GO:0033036	macromolecule localization	IEP	Enrichment
BP	GO:0034470	ncRNA processing	IEP	Enrichment
BP	GO:0042254	ribosome biogenesis	IEP	Enrichment
BP	GO:0043244	regulation of protein-containing complex disassembly	IEP	Enrichment
BP	GO:0044085	cellular component biogenesis	IEP	Enrichment
MF	GO:0045182	translation regulator activity	IEP	Enrichment
BP	GO:0045184	establishment of protein localization	IEP	Enrichment
MF	GO:0050145	nucleoside monophosphate kinase activity	IEP	Enrichment
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	Enrichment
MF	GO:0097159	organic cyclic compound binding	IEP	Enrichment
MF	GO:1901363	heterocyclic compound binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001063	Ribosomal_L22	5	108

External Links

No external refs found!

AAL22298 (STM3435, rplV)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation